RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
TUBE1-201ENST00000368657 HMGCRP04035 888 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 COL6A1P12109 1028 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 SHHQ15465 462 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
TUBE1-201ENST00000368657 CERS5Q8N5B7 392 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
TUBE1-201ENST00000368657 HOOK2Q96ED9 719 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 CD209Q9NNX6 404 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.25
TUBE1-201ENST00000368657 DDX60LQ5H9U9 1706 aaKnown RBP13.51□□□□□ -0.25
TUBE1-201ENST00000368657 LRRC26Q2I0M4 334 aa13.51□□□□□ -0.25
TUBE1-201ENST00000368657 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
TUBE1-201ENST00000368657 PRKAG2Q9UGJ0 569 aa13.51□□□□□ -0.25
TUBE1-201ENST00000368657 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
TUBE1-201ENST00000368657 NEFMP07197 916 aa13.5□□□□□ -0.25
TUBE1-201ENST00000368657 TMEM31Q5JXX7 168 aa13.5□□□□□ -0.25
TUBE1-201ENST00000368657 TMEM39BQ9GZU3 492 aa13.5□□□□□ -0.25
TUBE1-201ENST00000368657 AOX1Q06278 1338 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 CYP2C8P10632 490 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 MRE11P49959 708 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 CCDC85AQ96PX6 553 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-201ENST00000368657 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
TUBE1-201ENST00000368657 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 CACNA1AO00555 2505 aa13.49□□□□□ -0.25
TUBE1-201ENST00000368657 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-201ENST00000368657 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-201ENST00000368657 MOGSQ13724 837 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 GRIN2CQ14957 1233 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 AKNAD1Q5T1N1 836 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 MIER1Q8N108 512 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 SERPINA10Q9UK55 444 aa13.48□□□□□ -0.25
TUBE1-201ENST00000368657 DCAF15Q66K64 600 aa13.47□□□□□ -0.25
TUBE1-201ENST00000368657 GPAT2Q6NUI2 795 aa13.47□□□□□ -0.25
TUBE1-201ENST00000368657 CXCL11O14625 94 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 GPR37L1O60883 481 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 FASTKD5Q7L8L6 764 aaKnown RBP13.46□□□□□ -0.25
TUBE1-201ENST00000368657 RIC3Q7Z5B4 369 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.25
TUBE1-201ENST00000368657 IL1R1P14778 569 aa13.45□□□□□ -0.26
TUBE1-201ENST00000368657 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
TUBE1-201ENST00000368657 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
TUBE1-201ENST00000368657 PPM1EQ8WY54 764 aa13.45□□□□□ -0.26
TUBE1-201ENST00000368657 GAS2L1Q99501 681 aaPredicted RBP13.45□□□□□ -0.26
TUBE1-201ENST00000368657 EPHX3Q9H6B9 360 aa13.45□□□□□ -0.26
TUBE1-201ENST00000368657 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
TUBE1-201ENST00000368657 KLRK1P26718 216 aa13.44□□□□□ -0.26
TUBE1-201ENST00000368657 KCNJ4P48050 445 aa13.44□□□□□ -0.26
TUBE1-201ENST00000368657 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
TUBE1-201ENST00000368657 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
TUBE1-201ENST00000368657 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
TUBE1-201ENST00000368657 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
TUBE1-201ENST00000368657 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
TUBE1-201ENST00000368657 BMP1P13497 986 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 IGHMBP2P38935 993 aaKnown RBP13.43□□□□□ -0.26
TUBE1-201ENST00000368657 FOXK2Q01167 660 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 ZNF576Q9H609 170 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
TUBE1-201ENST00000368657 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
TUBE1-201ENST00000368657 CTSWP56202 376 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 TRIM32Q13049 653 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 AAK1Q2M2I8 961 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 MAP3K21Q5TCX8 1036 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 FAM83AQ86UY5 434 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
TUBE1-201ENST00000368657 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 GJD2Q9UKL4 321 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 TTF2Q9UNY4 1162 aaKnown RBP13.42□□□□□ -0.26
TUBE1-201ENST00000368657 DOCK3Q8IZD9 2030 aa13.42□□□□□ -0.26
TUBE1-201ENST00000368657 INPP5BP32019 993 aa13.41□□□□□ -0.26
TUBE1-201ENST00000368657 NECAB3Q96P71 396 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-201ENST00000368657 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-201ENST00000368657 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-201ENST00000368657 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
TUBE1-201ENST00000368657 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
TUBE1-201ENST00000368657 ARAP2Q8WZ64 1704 aa13.41□□□□□ -0.26
TUBE1-201ENST00000368657 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-201ENST00000368657 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-201ENST00000368657 GABBR2O75899 941 aa13.4□□□□□ -0.26
TUBE1-201ENST00000368657 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
TUBE1-201ENST00000368657 FKBP1CQ5VVH2 108 aa13.4□□□□□ -0.26
TUBE1-201ENST00000368657 LHX8Q68G74 356 aa13.4□□□□□ -0.26
TUBE1-201ENST00000368657 GREM2Q9H772 168 aa13.4□□□□□ -0.26
TUBE1-201ENST00000368657 CXXC1Q9P0U4 656 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-201ENST00000368657 DNAJB2P25686 324 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 CRKP46108 304 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
TUBE1-201ENST00000368657 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
TUBE1-201ENST00000368657 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
TUBE1-201ENST00000368657 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms