RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PSMA5P28066 241 aa12.52□□□□□ -0.4
TPM3-212ENST00000368533 CHRNA5P30532 468 aa12.52□□□□□ -0.4
TPM3-212ENST00000368533 PLCB2Q00722 1185 aa12.52□□□□□ -0.4
TPM3-212ENST00000368533 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.4
TPM3-212ENST00000368533 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.4
TPM3-212ENST00000368533 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.4
TPM3-212ENST00000368533 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
TPM3-212ENST00000368533 VPS37CA5D8V6 355 aaPredicted RBP12.52□□□□□ -0.41
TPM3-212ENST00000368533 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
TPM3-212ENST00000368533 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
TPM3-212ENST00000368533 GNL3LQ9NVN8 582 aaKnown RBP12.52□□□□□ -0.41
TPM3-212ENST00000368533 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
TPM3-212ENST00000368533 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
TPM3-212ENST00000368533 ZFYP08048 801 aaPredicted RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM3-212ENST00000368533 RPAP1Q9BWH6 1393 aaPredicted RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 LRP5O75197 1615 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 ZNF213O14771 459 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 STX6O43752 255 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 JAK2O60674 1132 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.415e-7■■■■□ 22.9
TPM3-212ENST00000368533 TDO2P48775 406 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 TBC1D10CQ8IV04 446 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 ZNF384Q8TF68 577 aa12.51□□□□□ -0.41
TPM3-212ENST00000368533 STRBPQ96SI9 672 aaKnown RBP12.51□□□□□ -0.41
TPM3-212ENST00000368533 SYT1P21579 422 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 GJB2P29033 226 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 ZSCAN25Q6NSZ9 544 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM3-212ENST00000368533 B4E1Z4 1266 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
TPM3-212ENST00000368533 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 NAPBQ9H115 298 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
TPM3-212ENST00000368533 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
TPM3-212ENST00000368533 PRDM1O75626 825 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 ZSCAN22P10073 491 aaPredicted RBP12.49□□□□□ -0.41
TPM3-212ENST00000368533 NAA16Q6N069 864 aaPredicted RBP12.49□□□□□ -0.41
TPM3-212ENST00000368533 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 MYRIPQ8NFW9 859 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 KCNB2Q92953 911 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 ANKRD2Q9GZV1 360 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 NBPF3Q9H094 633 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
TPM3-212ENST00000368533 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 HS1BP3Q53T59 392 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 SENP2Q9HC62 589 aa12.49□□□□□ -0.41
TPM3-212ENST00000368533 MECOMQ03112 1051 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 FBXO33Q7Z6M2 555 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 ZNF512BQ96KM6 892 aaPredicted RBP12.48□□□□□ -0.41
TPM3-212ENST00000368533 MYL10Q9BUA6 226 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 GTPBP4Q9BZE4 634 aaKnown RBP12.48□□□□□ -0.41
TPM3-212ENST00000368533 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 KIF20AO95235 890 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
TPM3-212ENST00000368533 RALYLQ86SE5 291 aaKnown RBP12.48□□□□□ -0.41
TPM3-212ENST00000368533 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 TACC3Q9Y6A5 838 aa12.48□□□□□ -0.41
TPM3-212ENST00000368533 NEDD4P46934 1319 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 XDHP47989 1333 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
TPM3-212ENST00000368533 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
TPM3-212ENST00000368533 GUCY1B3Q02153 619 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 KRT32Q14532 448 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 DHX32Q7L7V1 743 aaKnown RBP12.47□□□□□ -0.41
TPM3-212ENST00000368533 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
TPM3-212ENST00000368533 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
TPM3-212ENST00000368533 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 MYH7P12883 1935 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 PRC1O43663 620 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
TPM3-212ENST00000368533 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
TPM3-212ENST00000368533 CRY2Q49AN0 593 aa12.46□□□□□ -0.41
TPM3-212ENST00000368533 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms