RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 SARM1Q6SZW1 724 aa21.02■□□□□ 0.96
UBQLN4-201ENST00000368309 PATL2C9JE40 543 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 MAP3K12Q12852 859 aa21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 ZRSR1Q15695 479 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 VPS37DQ86XT2 251 aa21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 TACC3Q9Y6A5 838 aa21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 EIF5P55010 431 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 CHAF1AQ13111 956 aaPredicted RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 AXDND1Q5T1B0 1012 aaPredicted RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 TOMM22Q9NS69 142 aa21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 ITGB4P16144 1822 aa21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 RIOK3O14730 519 aaKnown RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 PRKCSHP14314 528 aaPredicted RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 IQSEC3Q9UPP2 1182 aaPredicted RBP21.01■□□□□ 0.95
UBQLN4-201ENST00000368309 ATP6V1AP38606 617 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 INTS5Q6P9B9 1019 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 ZKSCAN3Q9BRR0 538 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 LY9Q9HBG7 655 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 MYO5AQ9Y4I1 1855 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 IFIT3O14879 490 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 MRFAP1L1Q96HT8 127 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 DISP2A7MBM2 1401 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 SLC3A2P08195 630 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 PFKFB1P16118 471 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 CPLX2Q6PUV4 134 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 UTP14AQ9BVJ6 771 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 NAT10Q9H0A0 1025 aaKnown RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 FAM217BQ9NTX9 383 aaPredicted RBP21■□□□□ 0.95
UBQLN4-201ENST00000368309 MYH15Q9Y2K3 1946 aa21■□□□□ 0.95
UBQLN4-201ENST00000368309 GOLGA8AA7E2F4 631 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 IARSP41252 1262 aaKnown RBP20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 LRRC8AQ8IWT6 810 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 TMEM87BQ96K49 555 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 STRCQ7RTU9 1775 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 RANBP6O60518 1105 aaKnown RBP20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 CDKL5O76039 1030 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 CDC25BP30305 580 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 CCDC82Q8N4S0 544 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 MIGA1Q8NAN2 632 aa20.99■□□□□ 0.95
UBQLN4-201ENST00000368309 SLC39A14Q15043 492 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 GLIPR1L2Q4G1C9 344 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 LRP6O75581 1613 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 GSG1L2A8MUP6 293 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 NTRK3Q16288 839 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 SLC12A7Q9Y666 1083 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 ATRNO75882 1429 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 GTF2F1P35269 517 aaKnown RBP eCLIP20.98■□□□□ 0.959e-8■■■■□ 23.4
UBQLN4-201ENST00000368309 ZNF710Q8N1W2 664 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 CCDC87Q9NVE4 849 aa20.98■□□□□ 0.95
UBQLN4-201ENST00000368309 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 CMA1P23946 247 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 LCORLQ8N3X6 602 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 MAP7D2Q96T17 732 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 MROH7-TTC4A0A0A0MT08 1334 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 NIP7Q9Y221 180 aaKnown RBP eCLIP20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 TDO2P48775 406 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 CLIC6Q96NY7 704 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 SLC4A4Q9Y6R1 1079 aa20.97■□□□□ 0.95
UBQLN4-201ENST00000368309 SLIT2O94813 1529 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 MYH7P12883 1935 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 CCDC69A6NI79 296 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 ALX1Q15699 326 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 TPD52L1Q16890 204 aaPredicted RBP20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 KDM4FA0A1W2PPD8 638 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 MFSD6Q6ZSS7 791 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 CMTR1Q8N1G2 835 aaKnown RBP20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 WTIPA6NIX2 430 aaPredicted RBP20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 TNNT1P13805 278 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 AKNAD1Q5T1N1 836 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 LRP2BPQ9P2M1 347 aa20.96■□□□□ 0.95
UBQLN4-201ENST00000368309 NUP98P52948 1817 aa20.95■□□□□ 0.95
UBQLN4-201ENST00000368309 GUCY1A2P33402 732 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 TRIM29Q14134 588 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 SGMS1Q86VZ5 419 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 SKILP12757 684 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 IGHMBP2P38935 993 aaKnown RBP20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 SYKP43405 635 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 BCL2L12Q9HB09 334 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 ITPK1Q13572 414 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 CCDC152Q4G0S7 254 aa20.95■□□□□ 0.94
UBQLN4-201ENST00000368309 LOC102724428A0A0B4J2F2 783 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 SIK1P57059 783 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 SHC4Q6S5L8 630 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 USP27XA6NNY8 438 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 CAMTA2O94983 1202 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 SSRP1Q08945 709 aaKnown RBP20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 DDB1Q16531 1140 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 ABCF2Q9UG63 623 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 LIFRP42702 1097 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 PTPAQ15257 358 aa20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
UBQLN4-201ENST00000368309 SMC2O95347 1197 aa20.93■□□□□ 0.94
UBQLN4-201ENST00000368309 CHRNDQ07001 517 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms