RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 CLUL1Q15846 466 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 GUCA1BQ9UMX6 200 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 RAD50Q92878 1312 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 TNFAIP3P21580 790 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 SEC62Q99442 399 aaKnown RBP17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 FAM184BQ9ULE4 1060 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 ATP5DP30049 168 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 HIBADHP31937 336 aaKnown RBP17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 STX17P56962 302 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC121Q6ZUS5 278 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 MBD4O95243 580 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 IVLP07476 585 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 FCHSD1Q86WN1 690 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 FLT4P35916 1363 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 DNM2P50570 870 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 AFAP1L2Q8N4X5 818 aa17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
NUCKS1-201ENST00000367142 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 HELLSQ9NRZ9 838 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 H0YIN7 160 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 ERCC6LQ2NKX8 1250 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 TRAF5O00463 557 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 SPOPO43791 374 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 PPP1R9BQ96SB3 815 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 C19orf44Q9H6X5 657 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 LARGE2Q8N3Y3 721 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC26Q8TAB7 109 aa17.6■□□□□ 0.41
NUCKS1-201ENST00000367142 UAP1Q16222 522 aaPredicted RBP17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 IFT81Q8WYA0 676 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 CACYBPQ9HB71 228 aaKnown RBP17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 RPUSD2Q8IZ73 545 aaKnown RBP17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 GSDMBQ8TAX9 411 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 GIPC1O14908 333 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 VAV2P52735 878 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 VPS52Q8N1B4 723 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 SAMD15Q9P1V8 674 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 CNNM4Q6P4Q7 775 aa17.59■□□□□ 0.41
NUCKS1-201ENST00000367142 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 GINS2Q9Y248 185 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 CIB2O75838 187 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 ARFGAP2Q8N6H7 521 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 TRERF1Q96PN7 1200 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 NKIRAS1Q9NYS0 192 aa17.58■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC87Q9NVE4 849 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 STIM2Q9P246 746 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 DNM1Q05193 864 aaKnown RBP17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 CUL4BQ13620 913 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 CCDC186Q7Z3E2 898 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 MCM6Q14566 821 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.4
NUCKS1-201ENST00000367142 VWA3AA6NCI4 1184 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 MNAT1P51948 309 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 ZNF174Q15697 407 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 NOC4LQ9BVI4 516 aaKnown RBP17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 KRT222Q8N1A0 295 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 ITIH3Q06033 890 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 CPLX4Q7Z7G2 160 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 ZKSCAN3Q9BRR0 538 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 BTG4Q9NY30 223 aa17.57■□□□□ 0.4
NUCKS1-201ENST00000367142 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 CCNT1O60563 726 aaKnown RBP17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 ZNF569Q5MCW4 686 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 SPC25Q9HBM1 224 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 PKNOX2Q96KN3 472 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 CTNND2Q9UQB3 1225 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 CWF19L2Q2TBE0 894 aaKnown RBP17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 DISP3Q9P2K9 1392 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 RXRAP19793 462 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 PDE4DQ08499 809 aa17.56■□□□□ 0.4
NUCKS1-201ENST00000367142 KIF22Q14807 665 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms