RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 KCNH3Q9ULD8 1083 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 PPP2R2CQ9Y2T4 447 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 UBE2Q2LH0YL09 131 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 CDKL5O76039 1030 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 GPTP24298 496 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 SCARF1Q14162 830 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 GRAMD1CQ8IYS0 662 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 ZKSCAN3Q9BRR0 538 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 INCENPQ9NQS7 918 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 NFE2L3Q9Y4A8 694 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 ZBTB43O43298 467 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 OAS2P29728 719 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 LMAN1P49257 510 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 NCAPHQ15003 741 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 RABL6Q3YEC7 729 aaPredicted RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 TMEM67Q5HYA8 995 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■□□□ 12.5
CD46-208ENST00000367042 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 ERBB3P21860 1342 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 POLR2DO15514 142 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 AFMP43652 599 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 HNRNPH2P55795 449 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 FOXO4P98177 505 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 SHC4Q6S5L8 630 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 WDR24Q96S15 920 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 SALL1Q9NSC2 1324 aa9.39□□□□□ -0.91
CD46-208ENST00000367042 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
CD46-208ENST00000367042 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 SLIT3O75094 1523 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 ARHGAP6O43182 974 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 H2AFXP16104 143 aaPredicted RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 AXDND1Q5T1B0 1012 aaPredicted RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 KRBA2Q6ZNG9 492 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 TOGARAM2Q6ZUX3 1019 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 PPFIBP1Q86W92 1011 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 APPBP2Q92624 585 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 AKAP2Q9Y2D5 859 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 JCADQ9P266 1359 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 PLA2G4AP47712 749 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 KIF4BQ2VIQ3 1234 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 SENP2Q9HC62 589 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 IKBKBO14920 756 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 COBLO75128 1261 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 ANTXR2P58335 489 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 SMC1AQ14683 1233 aaKnown RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
CD46-208ENST00000367042 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
CD46-208ENST00000367042 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 PHLPP2Q6ZVD8 1323 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 EFCAB8A8MWE9 144 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 BTBD18B2RXH4 712 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 CYP27B1O15528 508 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 PHACTR2O75167 634 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 ZFYP08048 801 aaPredicted RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 TPM1P09493 284 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 ST5P78524 1137 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 MB21D2Q8IYB1 491 aaPredicted RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 DHX58Q96C10 678 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 BPIFA3Q9BQP9 254 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 AGXT2Q9BYV1 514 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 NCAPD2Q15021 1401 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 CDC27P30260 824 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 PDE4BQ07343 736 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 MTF1Q14872 753 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 NBPF15Q8N660 670 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 KRI1Q8N9T8 703 aaKnown RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 NAPBQ9H115 298 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 SAMSN1Q9NSI8 373 aaKnown RBP9.37□□□□□ -0.91
CD46-208ENST00000367042 KIF1AQ12756 1690 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 MST1RQ04912 1400 aa9.37□□□□□ -0.91
CD46-208ENST00000367042 TADA3O75528 432 aa9.36□□□□□ -0.91
CD46-208ENST00000367042 RHOXF2BP0C7M4 288 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms