RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CUL4AQ13619 759 aa12.99□□□□□ -0.33
RD3-201ENST00000367002 DDB1Q16531 1140 aa12.99□□□□□ -0.33
RD3-201ENST00000367002 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
RD3-201ENST00000367002 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
RD3-201ENST00000367002 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 HSF2BPO75031 334 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
RD3-201ENST00000367002 TUBB4BP68371 445 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 KRT79Q5XKE5 535 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 MLKLQ8NB16 471 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 DSCC1Q9BVC3 393 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
RD3-201ENST00000367002 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 RGS12O14924 1447 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 NLRP12P59046 1061 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 ADALQ6DHV7 355 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 VPS18Q9P253 973 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
RD3-201ENST00000367002 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 TUBBP07437 444 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 CCDC122Q5T0U0 273 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 ARHGAP6O43182 974 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 TNNI2P48788 182 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 PUM3Q15397 648 aaKnown RBP12.97□□□□□ -0.33
RD3-201ENST00000367002 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 STXBP4Q6ZWJ1 553 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 ERMNQ8TAM6 284 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
RD3-201ENST00000367002 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 GNA11P29992 359 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 KIAA0753Q2KHM9 967 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.96□□□□□ -0.33
RD3-201ENST00000367002 IVLP07476 585 aa12.96□□□□□ -0.33
RD3-201ENST00000367002 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
RD3-201ENST00000367002 ZRSR2Q15696 482 aaKnown RBP12.96□□□□□ -0.33
RD3-201ENST00000367002 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
RD3-201ENST00000367002 TAF5LO75529 589 aa12.96□□□□□ -0.34
RD3-201ENST00000367002 PICALMQ13492 652 aa12.96□□□□□ -0.34
RD3-201ENST00000367002 GCOM1H8Y6P7 765 aaPredicted RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 MYZAPP0CAP1 466 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 STAMQ92783 540 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 TMEM2Q9UHN6 1383 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 PIK3AP1Q6ZUJ8 805 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 PDE8AO60658 829 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 KRT9P35527 623 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 SMC1AQ14683 1233 aaKnown RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
RD3-201ENST00000367002 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 UGGT1Q9NYU2 1555 aa12.95□□□□□ -0.34
RD3-201ENST00000367002 PFKFB2O60825 505 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 LPIN2Q92539 896 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 RRP36Q96EU6 259 aaKnown RBP12.94□□□□□ -0.34
RD3-201ENST00000367002 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 MTX1Q13505 466 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 POSTNQ15063 836 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 SYNMO15061 1565 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 OPA1O60313 960 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 VAV2P52735 878 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 DNAJC21Q5F1R6 531 aaKnown RBP12.94□□□□□ -0.34
RD3-201ENST00000367002 COPRSQ9NQ92 184 aa12.94□□□□□ -0.34
RD3-201ENST00000367002 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
RD3-201ENST00000367002 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
RD3-201ENST00000367002 GIMAP7Q8NHV1 300 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 SELENOOQ9BVL4 669 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 CTNND2Q9UQB3 1225 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 CCDC172P0C7W6 258 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 EZRP15311 586 aaKnown RBP12.93□□□□□ -0.34
RD3-201ENST00000367002 PFKFB1P16118 471 aa12.93□□□□□ -0.34
RD3-201ENST00000367002 CHMP4BP1P59074 171 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms