RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 TTLL7Q6ZT98 887 aa11.52□□□□□ -0.56
ATF3-206ENST00000366987 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.56
ATF3-206ENST00000366987 CCDC114Q96M63 670 aa11.52□□□□□ -0.56
ATF3-206ENST00000366987 FAM169AQ9Y6X4 670 aa11.52□□□□□ -0.56
ATF3-206ENST00000366987 ABCC6O95255 1503 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
ATF3-206ENST00000366987 HSPA1LP34931 641 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 SMTNP53814 917 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 GNAI1P63096 354 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 KBTBD12Q3ZCT8 623 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 HDXQ7Z353 690 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
ATF3-206ENST00000366987 DNAI1Q9UI46 699 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 TMEM98Q9Y2Y6 226 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
ATF3-206ENST00000366987 SENP3-EIF4A1A0A087X0R7 540 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 FLT3P36888 993 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 SNX1Q13596 522 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 NAA25Q14CX7 972 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATF3-206ENST00000366987 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 CEP85LQ5SZL2 805 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 C16orf87Q6PH81 154 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 MTHFD1LQ6UB35 978 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
ATF3-206ENST00000366987 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 LMBR1Q8WVP7 490 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 CORO1CQ9ULV4 474 aaPredicted RBP11.51□□□□□ -0.57
ATF3-206ENST00000366987 BARX2Q9UMQ3 279 aaPredicted RBP11.51□□□□□ -0.57
ATF3-206ENST00000366987 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
ATF3-206ENST00000366987 GCP02774 474 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 CCDC175P0C221 793 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 RANBP1P43487 201 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 FNTAP49354 379 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 IFFO1Q0D2I5 559 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 DRP2Q13474 957 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
ATF3-206ENST00000366987 LRRFIP1Q32MZ4 808 aaKnown RBP11.5□□□□□ -0.57
ATF3-206ENST00000366987 CAPRIN2Q6IMN6 1127 aaKnown RBP11.5□□□□□ -0.57
ATF3-206ENST00000366987 PHC3Q8NDX5 983 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
ATF3-206ENST00000366987 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 RTL1A6NKG5 1358 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 H3BQF6 201 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 ZNF75DP51815 510 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 UBE2HP62256 183 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 ZBED6P86452 979 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 POSTNQ15063 836 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 DRC7Q8IY82 874 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 EPAS1Q99814 870 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 CPDO75976 1380 aa11.5□□□□□ -0.57
ATF3-206ENST00000366987 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
ATF3-206ENST00000366987 AP5Z1O43299 807 aa11.49□□□□□ -0.57
ATF3-206ENST00000366987 GBP2P32456 591 aaPredicted RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 PAPOLAP51003 745 aaKnown RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 GSDMDP57764 484 aa11.49□□□□□ -0.57
ATF3-206ENST00000366987 DCTN1Q14203 1278 aa11.49□□□□□ -0.57
ATF3-206ENST00000366987 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 INTS4Q96HW7 963 aaKnown RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 FAM81BQ96LP2 452 aa11.49□□□□□ -0.57
ATF3-206ENST00000366987 MPHOSPH6Q99547 160 aaKnown RBP11.49□□□□□ -0.57
ATF3-206ENST00000366987 TRIM4Q9C037 500 aa11.49□□□□□ -0.57
ATF3-206ENST00000366987 RAD21O60216 631 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 LRMPQ12912 555 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■□□ 16.7
ATF3-206ENST00000366987 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 CCDC150Q8NCX0 1101 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 TRIM58Q8NG06 486 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 CCDC47Q96A33 483 aaKnown RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 KLC4Q9NSK0 619 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 PCDHGC5Q9Y5F6 944 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 COL14A1Q05707 1796 aaKnown RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 KIAA0754O94854 1291 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 DYNC1I2Q13409 638 aaKnown RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 KCNB1Q14721 858 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 SNCBQ16143 134 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 LONRF2Q1L5Z9 754 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 APBB1IPQ7Z5R6 666 aaPredicted RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
ATF3-206ENST00000366987 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 PEAK1Q9H792 1746 aa11.48□□□□□ -0.57
ATF3-206ENST00000366987 FLT4P35916 1363 aa11.47□□□□□ -0.57
ATF3-206ENST00000366987 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms