RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 SEPT14Q6ZU15 432 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 ZNF513Q8N8E2 541 aaPredicted RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 EFCAB8A8MWE9 144 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 ARMC2Q8NEN0 867 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 SGSM2O43147 1006 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 PTH1RQ03431 593 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 YIPF3Q9GZM5 350 aa13.28□□□□□ -0.28
PRKN-206ENST00000366898 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
PRKN-206ENST00000366898 GOLGA6BA6NDN3 693 aa13.27□□□□□ -0.28
PRKN-206ENST00000366898 IFT81Q8WYA0 676 aa13.27□□□□□ -0.28
PRKN-206ENST00000366898 SAAL1Q96ER3 474 aa13.27□□□□□ -0.28
PRKN-206ENST00000366898 INTS4Q96HW7 963 aaKnown RBP13.27□□□□□ -0.28
PRKN-206ENST00000366898 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.28
PRKN-206ENST00000366898 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.28
PRKN-206ENST00000366898 ELP1O95163 1332 aa13.27□□□□□ -0.28
PRKN-206ENST00000366898 HAND2P61296 217 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 TFCP2Q12800 502 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.298e-6■■□□□ 14
PRKN-206ENST00000366898 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 CLTAP09496 248 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 MXRA7P84157 204 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 PPP1R7Q15435 360 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 SPA17Q15506 151 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
PRKN-206ENST00000366898 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 CFAP58Q5T655 872 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 NAIF1Q69YI7 327 aaPredicted RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 CCDC170Q8IYT3 715 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 TLR7Q9NYK1 1049 aaKnown RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 MARCH6O60337 910 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 ANAPC15P60006 121 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 BRD3Q15059 726 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 SNCBQ16143 134 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 MPHOSPH8Q99549 860 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 PPANQ9NQ55 473 aaKnown RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 TAF4BQ92750 862 aa13.26□□□□□ -0.29
PRKN-206ENST00000366898 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 CCDC97Q96F63 343 aaPredicted RBP13.26□□□□□ -0.29
PRKN-206ENST00000366898 TIMM10P62072 90 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 IFT88Q13099 833 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 LMNTD2Q8IXW0 634 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 PFDN1O60925 122 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 FAM114A2Q9NRY5 505 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 GNL3LQ9NVN8 582 aaKnown RBP13.25□□□□□ -0.29
PRKN-206ENST00000366898 CRB1P82279 1406 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 E7EVH7 732 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 SEPT7Q16181 437 aaKnown RBP13.25□□□□□ -0.29
PRKN-206ENST00000366898 LRRC23Q53EV4 343 aaPredicted RBP13.25□□□□□ -0.29
PRKN-206ENST00000366898 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRKN-206ENST00000366898 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
PRKN-206ENST00000366898 CHUKO15111 745 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 IFIT1P09914 478 aaKnown RBP13.24□□□□□ -0.29
PRKN-206ENST00000366898 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 CAPS2Q9BXY5 557 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
PRKN-206ENST00000366898 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 IFT172Q9UG01 1749 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 TLDC2A0PJX2 215 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 A1BGP04217 495 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 TUBBP07437 444 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 ADCK5Q3MIX3 580 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
PRKN-206ENST00000366898 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
PRKN-206ENST00000366898 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
PRKN-206ENST00000366898 ZNF594Q96JF6 807 aaPredicted RBP13.24□□□□□ -0.29
PRKN-206ENST00000366898 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms