RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 MAP4K3Q8IVH8 894 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 DMRTC2Q8IXT2 367 aaPredicted RBP7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 KANSL3Q9P2N6 904 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 GNEQ9Y223 722 aaKnown RBP7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 TET3O43151 1660 aa7.95□□□□□ -1.14
RNU4-4P-201ENST00000364588 A6NHS1 94 aa7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 TNFRSF21O75509 655 aa7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 CYP2E1P05181 493 aaPredicted RBP7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 KCNA6P17658 529 aa7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 NRG1Q02297 640 aaPredicted RBP7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 GCC2Q8IWJ2 1684 aa7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
RNU4-4P-201ENST00000364588 ROBO1Q9Y6N7 1651 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 C9orf172C9J069 976 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 ATP11AP98196 1134 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 CCDC87Q9NVE4 849 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 SLC52A1Q9NWF4 448 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 CNTN3Q9P232 1028 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 TRIM33Q9UPN9 1127 aa7.93□□□□□ -1.14
RNU4-4P-201ENST00000364588 EDN3P14138 238 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 CEP135Q66GS9 1140 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 IL22RA1Q8N6P7 574 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 CEP120Q8N960 986 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 CITED4Q96RK1 184 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 CHRDQ9H2X0 955 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 RGS17Q9UGC6 210 aaPredicted RBP7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 FAM135BQ49AJ0 1406 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 RPRD2Q5VT52 1461 aaKnown RBP7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 NWD1Q149M9 1564 aa7.92□□□□□ -1.14
RNU4-4P-201ENST00000364588 NEFLP07196 543 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 PTPRAP18433 802 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 GATA4P43694 442 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 GRIK4Q16099 956 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 LENG1Q96BZ8 264 aaPredicted RBP7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 SALL4Q9UJQ4 1053 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 AMOTL2Q9Y2J4 779 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 ZFYVE9O95405 1425 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 RIMS2Q9UQ26 1411 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 NKTRP30414 1462 aaKnown RBP7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 UNC13BO14795 1591 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 TMEM131LA2VDJ0 1609 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 E9PCH4 1651 aa7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 CHD2O14647 1828 aaKnown RBP7.91□□□□□ -1.14
RNU4-4P-201ENST00000364588 MSH6P52701 1360 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 SOWAHDA6NJG2 315 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 PATL2C9JE40 543 aaKnown RBP7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 CDC27P30260 824 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 BAG6P46379 1132 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 KCNA1Q09470 495 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 FOXD3Q9UJU5 478 aaPredicted RBP7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 USP21Q9UK80 565 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 PPME1Q9Y570 386 aa7.9□□□□□ -1.14
RNU4-4P-201ENST00000364588 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 PLEKHG1Q9ULL1 1385 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 SELPP16109 830 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 ITGAEP38570 1179 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 FAM117BQ6P1L5 589 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 FAM129BQ96TA1 746 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
RNU4-4P-201ENST00000364588 EREGO14944 169 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 CABP4P57796 275 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 ADGRE1Q14246 886 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 MBTPS1Q14703 1052 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 ECM1Q16610 540 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 DZANK1Q9NVP4 752 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 IQGAP3Q86VI3 1631 aa7.88□□□□□ -1.15
RNU4-4P-201ENST00000364588 PDE2AO00408 941 aaPredicted RBP7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 DEAF1O75398 565 aaPredicted RBP7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 TMEM102Q8N9M5 508 aaPredicted RBP7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 DMRTB1Q96MA1 342 aa7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
RNU4-4P-201ENST00000364588 ADAMTS13Q76LX8 1427 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 DLL1O00548 723 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 SHISA2Q6UWI4 295 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 RBCK1Q9BYM8 510 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 ADAM19Q9H013 955 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 TBX22Q9Y458 520 aa7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.86□□□□□ -1.15
RNU4-4P-201ENST00000364588 NUP155O75694 1391 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 COL16A1Q07092 1604 aaPredicted RBP7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 ROCK1Q13464 1354 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 H3BRJ5 948 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 SETDB1Q15047 1291 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 WNT8BQ93098 351 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 POP1Q99575 1024 aaKnown RBP7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 OSMRQ99650 979 aa7.85□□□□□ -1.15
RNU4-4P-201ENST00000364588 ZKSCAN3Q9BRR0 538 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms