RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 FAM13AO94988 1023 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 PTPN12Q05209 780 aaKnown RBP5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 BNIP3Q12983 259 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 TMEM132AQ24JP5 1023 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 POLIQ9UNA4 740 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 AP4E1Q9UPM8 1137 aa5.16□□□□□ -1.58
RNU6-238P-201ENST00000363313 A6NHS1 94 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 SLFN14P0C7P3 912 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 CILP2Q8IUL8 1156 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 GALNT12Q8IXK2 581 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 CCER1Q8TC90 406 aaPredicted RBP5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 TCF12Q99081 682 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 ATXN3LQ9H3M9 355 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 DAGLAQ9Y4D2 1042 aa5.15□□□□□ -1.59
RNU6-238P-201ENST00000363313 DYNC1LI2O43237 492 aaPredicted RBP5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 TSPAN15O95858 294 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 NEFLP07196 543 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 CTSBP07858 339 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 MPSTP25325 297 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 RAP1GAPP47736 663 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 RPS26P11Q5JNZ5 115 aaPredicted RBP5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 ANGEL2Q5VTE6 544 aaKnown RBP5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 KIAA0319Q5VV43 1072 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 PLD6Q8N2A8 252 aaKnown RBP5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 LRRN4CLQ8ND94 238 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 PBXIP1Q96AQ6 731 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 HRASLS5Q96KN8 279 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 TRIM56Q9BRZ2 755 aaKnown RBP5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 CRIM1Q9NZV1 1036 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 ADAMTS6Q9UKP5 1117 aa5.14□□□□□ -1.59
RNU6-238P-201ENST00000363313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 A0A1W2PP55 124 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 LRRC10BA6NIK2 292 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 FAM87AP0C7U9 286 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 ITPKAP23677 461 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 SF3B2Q13435 895 aaKnown RBP5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 AOC3Q16853 763 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 ZSWIM9Q86XI8 627 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 GJD3Q8N144 294 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 WDR18Q9BV38 432 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 TNKS2Q9H2K2 1166 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 LIN7BQ9HAP6 207 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 LATS2Q9NRM7 1088 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 SLAIN2Q9P270 581 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 FOXD3Q9UJU5 478 aaPredicted RBP5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 PPP1R9AQ9ULJ8 1098 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 MTMR7Q9Y216 660 aa5.13□□□□□ -1.59
RNU6-238P-201ENST00000363313 METTL12A8MUP2 240 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 CEACAM5P06731 702 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 GRIA4P48058 902 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 GTF3C2Q8WUA4 911 aaPredicted RBP5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 PIDD1Q9HB75 910 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 KRT82Q9NSB4 513 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 PCOLCE2Q9UKZ9 415 aa5.12□□□□□ -1.59
RNU6-238P-201ENST00000363313 TMPRSS2O15393 492 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 OXCT1P55809 520 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 ID3Q02535 119 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 AAMPQ13685 434 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 KCNMB1Q16558 191 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 SPRED3Q2MJR0 410 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 LILRA6Q6PI73 481 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 AMIGO3Q86WK7 504 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 SMYD4Q8IYR2 804 aaPredicted RBP5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 ASB11Q8WXH4 323 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 ZNF576Q9H609 170 aa5.11□□□□□ -1.59
RNU6-238P-201ENST00000363313 IGF2BP3O00425 579 aaKnown RBP eCLIP5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 FZD6O60353 706 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 CFPP27918 469 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 AFMP43652 599 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 FKBP4Q02790 459 aaKnown RBP eCLIP5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 PDE3AQ14432 1141 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 KIF4BQ2VIQ3 1234 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 ARHGAP27Q6ZUM4 889 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 ANKLE2Q86XL3 938 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 FANCD2OSQ96PS1 177 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 LMCD1Q9NZU5 365 aa5.1□□□□□ -1.59
RNU6-238P-201ENST00000363313 NCANO14594 1321 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 ZNF503-AS2A6NEH8 195 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 PRRG2O14669 202 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 C1QL4Q86Z23 238 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 DUSP23Q9BVJ7 150 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 DISC1Q9NRI5 854 aa5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNU6-238P-201ENST00000363313 ECEL1O95672 775 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 SSFA2P28290 1259 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 CDK5R2Q13319 367 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 FAM181AQ8N9Y4 354 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 GTF2IRD1Q9UHL9 959 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 PLAGL2Q9UPG8 496 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 PCDHGC5Q9Y5F6 944 aa5.08□□□□□ -1.6
RNU6-238P-201ENST00000363313 MLANAQ16655 118 aa5.07□□□□□ -1.6
RNU6-238P-201ENST00000363313 PRPF40BQ6NWY9 871 aaKnown RBP5.07□□□□□ -1.6
RNU6-238P-201ENST00000363313 TTLL10Q6ZVT0 673 aa5.07□□□□□ -1.6
RNU6-238P-201ENST00000363313 LRRC56Q8IYG6 542 aaPredicted RBP5.07□□□□□ -1.6
RNU6-238P-201ENST00000363313 LGR6Q9HBX8 967 aa5.07□□□□□ -1.6
RNU6-238P-201ENST00000363313 POLR3DP05423 398 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms