RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CYP19A1P11511 503 aaPredicted RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 GPTP24298 496 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 PNOCQ13519 176 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 ADALQ6DHV7 355 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 BTG4Q9NY30 223 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 FANCGO15287 622 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 MICU3Q86XE3 530 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 TIAM2Q8IVF5 1701 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 CTAGE5O15320 804 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 NCAPHQ15003 741 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 ZNF771Q7L3S4 317 aaPredicted RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
SMC3-201ENST00000361804 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
SMC3-201ENST00000361804 WTIPA6NIX2 430 aaPredicted RBP12.28□□□□□ -0.44
SMC3-201ENST00000361804 ZRSR1Q15695 479 aaKnown RBP12.28□□□□□ -0.44
SMC3-201ENST00000361804 CYB5R4Q7L1T6 521 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 PPP1R13BQ96KQ4 1090 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 APPP05067 770 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 TBC1D10CQ8IV04 446 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 DDX41Q9UJV9 622 aaKnown RBP12.28□□□□□ -0.44
SMC3-201ENST00000361804 CDK5RAP2Q96SN8 1893 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 GPAA1O43292 621 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 CDC27P30260 824 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 AXDND1Q5T1B0 1012 aaPredicted RBP12.28□□□□□ -0.44
SMC3-201ENST00000361804 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
SMC3-201ENST00000361804 STRN4Q9NRL3 753 aa12.28□□□□□ -0.44
SMC3-201ENST00000361804 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.44
SMC3-201ENST00000361804 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.44
SMC3-201ENST00000361804 KIF23Q02241 960 aaPredicted RBP12.27□□□□□ -0.45
SMC3-201ENST00000361804 IMMTQ16891 758 aaKnown RBP12.27□□□□□ -0.45
SMC3-201ENST00000361804 OGFRQ9NZT2 677 aa12.27□□□□□ -0.45
SMC3-201ENST00000361804 COL1A1P02452 1464 aaPredicted RBP12.27□□□□□ -0.45
SMC3-201ENST00000361804 B4E1Z4 1266 aa12.27□□□□□ -0.45
SMC3-201ENST00000361804 GRIN1Q05586 938 aa12.27□□□□□ -0.45
SMC3-201ENST00000361804 ZNF827Q17R98 1081 aa12.27□□□□□ -0.45
SMC3-201ENST00000361804 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
SMC3-201ENST00000361804 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
SMC3-201ENST00000361804 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
SMC3-201ENST00000361804 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 IDH1O75874 414 aaKnown RBP12.26□□□□□ -0.45
SMC3-201ENST00000361804 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 MCAMP43121 646 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 SHC4Q6S5L8 630 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 RALYLQ86SE5 291 aaKnown RBP12.26□□□□□ -0.45
SMC3-201ENST00000361804 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
SMC3-201ENST00000361804 GRAMD1CQ8IYS0 662 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 ZKSCAN3Q9BRR0 538 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 PLA2G12BQ9BX93 195 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 CGNQ9P2M7 1197 aaKnown RBP12.26□□□□□ -0.45
SMC3-201ENST00000361804 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 FANCCQ00597 558 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 PDE4BQ07343 736 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 HOMER1Q86YM7 354 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 FOXP4Q8IVH2 680 aaPredicted RBP12.26□□□□□ -0.45
SMC3-201ENST00000361804 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
SMC3-201ENST00000361804 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 ZNF213O14771 459 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMC3-201ENST00000361804 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 VPS37DQ86XT2 251 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 ALG1Q9BT22 464 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
SMC3-201ENST00000361804 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 ZBTB1Q9Y2K1 713 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 CAVIN2O95810 425 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
SMC3-201ENST00000361804 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 ZBTB22O15209 634 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 LONRF3Q496Y0 759 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 GTPBP4Q9BZE4 634 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 PIH1D3Q9NQM4 214 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 GNL2Q13823 731 aaKnown RBP12.24□□□□□ -0.45
SMC3-201ENST00000361804 KRT40Q6A162 431 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
SMC3-201ENST00000361804 FANCLQ9NW38 375 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms