RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 TSHZ3Q63HK5 1081 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 CCDC42Q96M95 316 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 SPTLC2O15270 562 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 CNGA1P29973 690 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 GNG11P61952 73 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 KIF5AQ12840 1032 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 LETM2Q2VYF4 491 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
CLIP1-203ENST00000361654 TRMT1Q9NXH9 659 aaKnown RBP12.31□□□□□ -0.44
CLIP1-203ENST00000361654 PSMC4P43686 418 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 ARID5AQ03989 594 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 SNW1Q13573 536 aaKnown RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 LZTS2Q9BRK4 669 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 CHMP2AO43633 222 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 PROCA1Q8NCQ7 364 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 FAM193BQ96PV7 902 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 PA2G4Q9UQ80 394 aaKnown RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 NECAB1Q8N987 351 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 GIMAP7Q8NHV1 300 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 ZWINTO95229 277 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 CBX1P83916 185 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 RASA3Q14644 834 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
CLIP1-203ENST00000361654 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 EYA1Q99502 592 aa12.3□□□□□ -0.44
CLIP1-203ENST00000361654 E7EVH7 732 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 KRT86O43790 486 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CRCPO75575 148 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 P4HA1P13674 534 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-203ENST00000361654 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CEP128Q6ZU80 1094 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CFAP57Q96MR6 1250 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 RXRBP28702 533 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 GABPAQ06546 454 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-203ENST00000361654 GLG1Q92896 1179 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 STIM2Q9P246 746 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CCNA1P78396 465 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 AGTPBP1Q9UPW5 1226 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
CLIP1-203ENST00000361654 SSFA2P28290 1259 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 PAGR1Q9BTK6 254 aa12.29□□□□□ -0.44
CLIP1-203ENST00000361654 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
CLIP1-203ENST00000361654 GIPC1O14908 333 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 PAIP2Q9BPZ3 127 aaKnown RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 CACYBPQ9HB71 228 aaKnown RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 SDSP20132 328 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 YWHAEP62258 255 aaKnown RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 LPIN2Q92539 896 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 SEL1L2Q5TEA6 688 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 MLXIPQ9HAP2 919 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 TRAF5O00463 557 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 VIMP08670 466 aaKnown RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 FBLN1P23142 703 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 OTUD6AQ7L8S5 288 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
CLIP1-203ENST00000361654 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 ABCC10Q5T3U5 1492 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 DUOX2Q9NRD8 1548 aa12.28□□□□□ -0.44
CLIP1-203ENST00000361654 ADCY7P51828 1080 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 ZBTB16Q05516 673 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 CALCOCO2Q13137 446 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 CFAP157Q5JU67 520 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 MAP3K1Q13233 1512 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 MROH5Q6ZUA9 1318 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 KAT6BQ8WYB5 2073 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 CTAGE15A4D2H0 777 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 HOXB7P09629 217 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 CTAGE8P0CG41 777 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 MCTP2Q6DN12 878 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 CTAGE6Q86UF2 777 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms