RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 LIN9Q5TKA1 542 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 CASC4Q6P4E1 433 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 TRMT1LQ7Z2T5 733 aaKnown RBP9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 KRT23Q9C075 422 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 RAB17Q9H0T7 212 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 A0A1B0GW55 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L2P0CJ85 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L3P0CJ86 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L4P0CJ87 422 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L5P0CJ88 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L6P0CJ89 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4L7P0CJ90 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 DUX4Q9UBX2 424 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 WTAPQ15007 396 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 EPB41P11171 864 aaKnown RBP9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 NUDCD3Q8IVD9 361 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 LMOD1P29536 600 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■■■■■ 28.4
NCKAP1-202ENST00000361354 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 VEZTQ9HBM0 779 aa9.36□□□□□ -0.91
NCKAP1-202ENST00000361354 ZSCAN26Q16670 478 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 DCAF17Q5H9S7 520 aaPredicted RBP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 PANK2Q9BZ23 570 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 RABEP2Q9H5N1 569 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 KRT5P13647 590 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 NSMCE1Q8WV22 266 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 SYCE1Q8N0S2 351 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 BIRC2Q13490 618 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 CEP19Q96LK0 163 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 RTL9Q8NET4 1388 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 DNAJC25Q9H1X3 360 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 SKOR1P84550 965 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 OAS2P29728 719 aaKnown RBP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 RGS16O15492 202 aaPredicted RBP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 NONOQ15233 471 aaKnown RBP eCLIP9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 MMEL1Q495T6 779 aa9.35□□□□□ -0.91
NCKAP1-202ENST00000361354 ZPR1O75312 459 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CYP26C1Q6V0L0 522 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 NAP1L4Q99733 375 aaKnown RBP9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 STX2P32856 288 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CALML3P27482 149 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 HEATR3Q7Z4Q2 680 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CNNM2Q9H8M5 875 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 ANGPTL3Q9Y5C1 460 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 TMTC2Q8N394 836 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 TRIM55Q9BYV6 548 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 RAPGEF1Q13905 1077 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 EFHD1Q9BUP0 239 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 IGSF3O75054 1194 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 KRT71Q3SY84 523 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 SCOCQ9UIL1 159 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 PPP1R2P41236 205 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■□□ 18
NCKAP1-202ENST00000361354 ANLNQ9NQW6 1124 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 TMCO5AQ8N6Q1 288 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 DAPK3O43293 454 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CFAP221Q4G0U5 840 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 RTN1Q16799 776 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 YY1AP1Q9H869 796 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 CLTAP09496 248 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 GRAMD4Q6IC98 578 aa9.34□□□□□ -0.91
NCKAP1-202ENST00000361354 FRMD3A2A2Y4 597 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 HOMEZQ8IX15 550 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 MYO18AQ92614 2054 aaKnown RBP9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 MAN1A1P33908 653 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 FBXO41Q8TF61 875 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 CLSTN2Q9H4D0 955 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 NEK2P51955 445 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 GNAQP50148 359 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 CTAGE3PQ8IX95 158 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 ANKRD12Q6UB98 2062 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 SLMAPQ14BN4 828 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 HOMER3Q9NSC5 361 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 KRT10P13645 584 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 U2AF2P26368 475 aaKnown RBP eCLIP9.33□□□□□ -0.927e-7■■□□□ 12.6
NCKAP1-202ENST00000361354 NOP14P78316 857 aaKnown RBP9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 NXNQ6DKJ4 435 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 CCDC138Q96M89 665 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 FAM8A1Q9UBU6 413 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 ALDH1L2Q3SY69 923 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 TOM1L2Q6ZVM7 507 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 MRFAP1Q9Y605 127 aa9.33□□□□□ -0.92
NCKAP1-202ENST00000361354 PPP2R5CQ13362 524 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms