RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 GLTPD2A6NH11 291 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 H7C1D1 291 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 SEC24BO95487 1268 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 PLCG2P16885 1265 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 ZNF280AP59817 542 aaPredicted RBP20.36■□□□□ 0.85
LMNA-202ENST00000361308 DLGAP5Q15398 846 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 APOBEC3HQ6NTF7 200 aaKnown RBP20.36■□□□□ 0.85
LMNA-202ENST00000361308 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
LMNA-202ENST00000361308 MAST2Q6P0Q8 1798 aa20.35■□□□□ 0.85
LMNA-202ENST00000361308 GNAT2P19087 354 aa20.35■□□□□ 0.85
LMNA-202ENST00000361308 MYOZ2Q9NPC6 264 aa20.35■□□□□ 0.85
LMNA-202ENST00000361308 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
LMNA-202ENST00000361308 MYH2Q9UKX2 1941 aa20.35■□□□□ 0.85
LMNA-202ENST00000361308 SHTN1A0MZ66 631 aa20.34■□□□□ 0.85
LMNA-202ENST00000361308 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
LMNA-202ENST00000361308 PRMT6Q96LA8 375 aaPredicted RBP20.34■□□□□ 0.85
LMNA-202ENST00000361308 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
LMNA-202ENST00000361308 SLC4A4Q9Y6R1 1079 aa20.34■□□□□ 0.85
LMNA-202ENST00000361308 APPP05067 770 aa20.33■□□□□ 0.85
LMNA-202ENST00000361308 HSPD1P10809 573 aaKnown RBP20.33■□□□□ 0.85
LMNA-202ENST00000361308 RBM26Q5T8P6 1007 aaKnown RBP20.33■□□□□ 0.85
LMNA-202ENST00000361308 CRNKL1Q9BZJ0 848 aaKnown RBP20.33■□□□□ 0.85
LMNA-202ENST00000361308 USP40Q9NVE5 1235 aa20.33■□□□□ 0.85
LMNA-202ENST00000361308 PATL2C9JE40 543 aaKnown RBP20.33■□□□□ 0.84
LMNA-202ENST00000361308 VPS53Q5VIR6 699 aa20.33■□□□□ 0.84
LMNA-202ENST00000361308 MTMR14Q8NCE2 650 aa20.33■□□□□ 0.84
LMNA-202ENST00000361308 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.84
LMNA-202ENST00000361308 SPDYE2BA6NHP3 402 aa20.32■□□□□ 0.84
LMNA-202ENST00000361308 PRKAB2O43741 272 aa20.32■□□□□ 0.84
LMNA-202ENST00000361308 SPDYE6P0CI01 402 aa20.32■□□□□ 0.84
LMNA-202ENST00000361308 CDC42EP5Q6NZY7 148 aa20.32■□□□□ 0.84
LMNA-202ENST00000361308 SAMD7Q7Z3H4 446 aa20.32■□□□□ 0.84
LMNA-202ENST00000361308 LSG1Q9H089 658 aaKnown RBP20.32■□□□□ 0.84
LMNA-202ENST00000361308 MYO1BO43795 1136 aa20.31■□□□□ 0.84
LMNA-202ENST00000361308 EPS15P42566 896 aa20.31■□□□□ 0.84
LMNA-202ENST00000361308 RHBDL3P58872 404 aa20.31■□□□□ 0.84
LMNA-202ENST00000361308 PTH1RQ03431 593 aa20.31■□□□□ 0.84
LMNA-202ENST00000361308 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
LMNA-202ENST00000361308 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
LMNA-202ENST00000361308 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
LMNA-202ENST00000361308 WNT10BO00744 389 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 USP5P45974 858 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 TEX11Q8IYF3 940 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 SDR42E1Q8WUS8 393 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 NACAP1Q9BZK3 213 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 TDRD3Q9H7E2 651 aaKnown RBP20.3■□□□□ 0.84
LMNA-202ENST00000361308 GSG1L2A8MUP6 293 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 EPB41L2O43491 1005 aaKnown RBP20.3■□□□□ 0.84
LMNA-202ENST00000361308 TBC1D10BQ4KMP7 808 aaPredicted RBP20.3■□□□□ 0.84
LMNA-202ENST00000361308 TGFBRAP1Q8WUH2 860 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 USP26Q9BXU7 913 aa20.3■□□□□ 0.84
LMNA-202ENST00000361308 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
LMNA-202ENST00000361308 EGFRP00533 1210 aa20.29■□□□□ 0.84
LMNA-202ENST00000361308 KIF4BQ2VIQ3 1234 aa20.29■□□□□ 0.84
LMNA-202ENST00000361308 NBPF9Q3BBW0 867 aa20.29■□□□□ 0.84
LMNA-202ENST00000361308 IFNL3Q8IZI9 196 aa20.29■□□□□ 0.84
LMNA-202ENST00000361308 ZBED3Q96IU2 234 aaPredicted RBP20.29■□□□□ 0.84
LMNA-202ENST00000361308 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
LMNA-202ENST00000361308 ADARB2Q9NS39 739 aaKnown RBP20.28■□□□□ 0.84
LMNA-202ENST00000361308 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
LMNA-202ENST00000361308 HACL1Q9UJ83 578 aa20.28■□□□□ 0.84
LMNA-202ENST00000361308 FOXP2O15409 715 aa20.27■□□□□ 0.84
LMNA-202ENST00000361308 FGAP02671 866 aa20.27■□□□□ 0.84
LMNA-202ENST00000361308 GIMAP6Q6P9H5 292 aa20.27■□□□□ 0.84
LMNA-202ENST00000361308 NAPBQ9H115 298 aa20.27■□□□□ 0.84
LMNA-202ENST00000361308 CTNNA3Q9UI47 895 aa20.27■□□□□ 0.84
LMNA-202ENST00000361308 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
LMNA-202ENST00000361308 IQCA1LA6NCM1 817 aa20.27■□□□□ 0.83
LMNA-202ENST00000361308 WDHD1O75717 1129 aaPredicted RBP20.27■□□□□ 0.83
LMNA-202ENST00000361308 TDO2P48775 406 aa20.27■□□□□ 0.83
LMNA-202ENST00000361308 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.83
LMNA-202ENST00000361308 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.83
LMNA-202ENST00000361308 RBM8AQ9Y5S9 174 aaKnown RBP20.27■□□□□ 0.83
LMNA-202ENST00000361308 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 CLRN2A0PK11 232 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 CACNB3P54284 484 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 PICALMQ13492 652 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 ALX1Q15699 326 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 SPDYE2Q495Y8 402 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 IDI2Q9BXS1 227 aa20.26■□□□□ 0.83
LMNA-202ENST00000361308 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
LMNA-202ENST00000361308 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
LMNA-202ENST00000361308 MCCP23508 829 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 EPHX2P34913 555 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 NFIAQ12857 509 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 VEZTQ9HBM0 779 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 MKRN1Q9UHC7 482 aaKnown RBP20.24■□□□□ 0.83
LMNA-202ENST00000361308 FLT1P17948 1338 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 NECTIN1Q15223 517 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
LMNA-202ENST00000361308 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
LMNA-202ENST00000361308 HSPA4P34932 840 aa20.23■□□□□ 0.83
LMNA-202ENST00000361308 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
LMNA-202ENST00000361308 TCP10Q12799 353 aa20.23■□□□□ 0.83
LMNA-202ENST00000361308 IMMTQ16891 758 aaKnown RBP20.23■□□□□ 0.83
LMNA-202ENST00000361308 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms