RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TGFB2P61812 414 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 TSGA10IPQ3SY00 556 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 HS1BP3Q53T59 392 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 NAA16Q6N069 864 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 DBNDD1Q9H9R9 158 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 ZNF646O15015 1829 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 G3V3G9 751 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 BRD1O95696 1058 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 DYNLL1P63167 89 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 GTF2IP78347 998 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 CC2D2BQ6DHV5 1058 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 STOX1Q6ZVD7 989 aa15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 RIOK1Q9BRS2 568 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 EPB41L4AQ9HCS5 686 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-201ENST00000360718 APPP05067 770 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 GNAT2P19087 354 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 ZSCAN30Q86W11 494 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 GPT2Q8TD30 523 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 AOC3Q16853 763 aa15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-201ENST00000360718 LDHBP07195 334 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 BLOC1S2Q6QNY1 142 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 DZIP1Q86YF9 867 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 CERS5Q8N5B7 392 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 SYAP1Q96A49 352 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 ZSWIM6Q9HCJ5 1215 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 PIM2Q9P1W9 311 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 COL4A5P29400 1685 aa15.53■□□□□ 0.08
SQSTM1-201ENST00000360718 MAGEB6P1A0A0J9YX57 407 aa15.52■□□□□ 0.08
SQSTM1-201ENST00000360718 GSG1L2A8MUP6 293 aa15.52■□□□□ 0.08
SQSTM1-201ENST00000360718 MSNP26038 577 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-201ENST00000360718 HAND2P61296 217 aa15.52■□□□□ 0.08
SQSTM1-201ENST00000360718 TTC14Q96N46 770 aa15.52■□□□□ 0.08
SQSTM1-201ENST00000360718 GRIPAP1Q4V328 841 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 CCDC93Q567U6 631 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 NLGN2Q8NFZ4 835 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 TBC1D22AQ8WUA7 517 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 NACAP1Q9BZK3 213 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 NBPF3Q9H094 633 aa15.52■□□□□ 0.07
SQSTM1-201ENST00000360718 PATL2C9JE40 543 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 GSTO1P78417 241 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 KIAA2012Q0VF49 1180 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 SDR42E1Q8WUS8 393 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 NEK1Q96PY6 1258 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 RBSNQ9H1K0 784 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 PDRG1Q9NUG6 133 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 AATFQ9NY61 560 aaKnown RBP eCLIP15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 CD2APQ9Y5K6 639 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 BAZ2AQ9UIF9 1905 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 WDR33Q9C0J8 1336 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 ZNF213O14771 459 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 ECE2O60344 883 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 FBXW7Q969H0 707 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 SLC4A4Q9Y6R1 1079 aa15.51■□□□□ 0.07
SQSTM1-201ENST00000360718 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 NOL8Q76FK4 1167 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 LARP6Q9BRS8 491 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 LDHCP07864 332 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 ALX1Q15699 326 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 DALRD3Q5D0E6 543 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 PODNQ7Z5L7 613 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 NKX2-3Q8TAU0 364 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 NAPBQ9H115 298 aa15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 ZNF277Q9NRM2 450 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-201ENST00000360718 ZMYM6O95789 1325 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 YDJCA8MPS7 323 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 E7EWF7 191 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 SMIM22K7EJ46 135 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 RPS6KB1P23443 525 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 FOXD4L5Q5VV16 416 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 RTKN2Q8IZC4 609 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 FOXD4L4Q8WXT5 416 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 PSMD1Q99460 953 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 NOL10Q9BSC4 688 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 TMEM63CQ9P1W3 806 aa15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-201ENST00000360718 AK2P54819 239 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 ANKRD1Q15327 319 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 CDK5RAP2Q96SN8 1893 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 F8W031 263 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 TDO2P48775 406 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
SQSTM1-201ENST00000360718 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms