RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
PCMTD1-201ENST00000360540 TNNI2P48788 182 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 GLI2P10070 1586 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 ABCA6Q8N139 1617 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 AKR1B10O60218 316 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 CYP27B1O15528 508 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 KRT2P35908 639 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
PCMTD1-201ENST00000360540 PDE6AP16499 860 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 VPS16Q9H269 839 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 LDHBP07195 334 aaKnown RBP16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 DSCC1Q9BVC3 393 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 GNAT2P19087 354 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 LETM2Q2VYF4 491 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 PPP1R9BQ96SB3 815 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 PNOCQ13519 176 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 EXOC1Q9NV70 894 aa16.05■□□□□ 0.16
PCMTD1-201ENST00000360540 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 CTSWP56202 376 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 POLA2Q14181 598 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 SLU7O95391 586 aaKnown RBP16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 FANCCQ00597 558 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 AIFM3Q96NN9 605 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 ZDHHC9Q9Y397 364 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 ELP1O95163 1332 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 NFE2L3Q9Y4A8 694 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
PCMTD1-201ENST00000360540 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 USP17L21D6R901 530 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 USP8P40818 1118 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 TAF4BQ92750 862 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 MAST3O60307 1309 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.164e-7■■■■□ 19.7
PCMTD1-201ENST00000360540 HIBADHP31937 336 aaKnown RBP16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 TSG101Q99816 390 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 XPO4Q9C0E2 1151 aaKnown RBP16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 FAM170AA1A519 330 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 LONRF3Q496Y0 759 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 GUCA1BQ9UMX6 200 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
PCMTD1-201ENST00000360540 SSR1P43307 286 aaKnown RBP16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 NOP2P46087 812 aaKnown RBP16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 ZC3H12CQ9C0D7 883 aaKnown RBP16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 PYCARDQ9ULZ3 195 aa16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 NECTIN1Q15223 517 aa16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 TAX1BP1Q86VP1 789 aa16.02■□□□□ 0.16
PCMTD1-201ENST00000360540 PHACTR2O75167 634 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 NDUFA8P51970 172 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 FEZ1Q99689 392 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 IL25Q9H293 177 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 PFKFB2O60825 505 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 RILPL1Q5EBL4 403 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 PRM3Q9NNZ6 103 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 FBXO3Q9UK99 471 aa16.02■□□□□ 0.15
PCMTD1-201ENST00000360540 M0R2C6 588 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 PSMA7O14818 248 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 PFKFB1P16118 471 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 UBXN1Q04323 297 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 SLF2Q8IX21 1173 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 COBLO75128 1261 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 DEXIO95424 95 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 DTHD1Q6ZMT9 781 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 IQUBQ8NA54 791 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 CHMP4BP1P59074 171 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 AMPD3Q01432 767 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 MAPKAPK5Q8IW41 473 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
PCMTD1-201ENST00000360540 ADCY9O60503 1353 aa16■□□□□ 0.15
PCMTD1-201ENST00000360540 PRKAB2O43741 272 aa16■□□□□ 0.15
PCMTD1-201ENST00000360540 CCNL1Q9UK58 526 aaPredicted RBP16■□□□□ 0.15
PCMTD1-201ENST00000360540 ALKQ9UM73 1620 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms