RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 P4HA1P13674 534 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 TNFAIP3P21580 790 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 HSPA1LP34931 641 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 ITIH3Q06033 890 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
CUX1-203ENST00000360264 FANCAO15360 1455 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 FAM76AQ8TAV0 307 aa10.83□□□□□ -0.68
CUX1-203ENST00000360264 GBP1P32455 592 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 NUP58Q9BVL2 599 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 DNAI1Q9UI46 699 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 CAPZA3Q96KX2 299 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 RSRC1Q96IZ7 334 aaKnown RBP10.82□□□□□ -0.68
CUX1-203ENST00000360264 I3L4J1 428 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 PUM3Q15397 648 aaKnown RBP10.82□□□□□ -0.68
CUX1-203ENST00000360264 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 AKR1B15C9JRZ8 316 aaPredicted RBP10.82□□□□□ -0.68
CUX1-203ENST00000360264 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 TRAF5O00463 557 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 CETN3O15182 167 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 TMEM87BQ96K49 555 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 ESYT1Q9BSJ8 1104 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 NOS1P29475 1434 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 ZKSCAN3Q9BRR0 538 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 AZI2Q9H6S1 392 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 GABPAQ06546 454 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 PPP2R5EQ16537 467 aa10.82□□□□□ -0.68
CUX1-203ENST00000360264 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
CUX1-203ENST00000360264 TMEM110-MUSTN1A8MSY1 372 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 PLCH2O75038 1416 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 ATP2A3Q93084 1043 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 KCNK9Q9NPC2 374 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 CHPF2Q9P2E5 772 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 PFDN6O15212 129 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 MIS12Q9H081 205 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 ATP2C2O75185 946 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
CUX1-203ENST00000360264 SPOPO43791 374 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 NACA2Q9H009 215 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 ARID5AQ03989 594 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
CUX1-203ENST00000360264 DNM2P50570 870 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 ANO6Q4KMQ2 910 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 SUPT20HQ8NEM7 779 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 TMX3Q96JJ7 454 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 RSPH14Q9UHP6 348 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 FLOT1O75955 427 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 SARNPP82979 210 aaKnown RBP10.81□□□□□ -0.68
CUX1-203ENST00000360264 IFT20Q8IY31 132 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 CNBD1Q8NA66 436 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 PPP1R9BQ96SB3 815 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 NUF2Q9BZD4 464 aa10.81□□□□□ -0.68
CUX1-203ENST00000360264 AOX1Q06278 1338 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 TFCP2L1Q9NZI6 479 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 PLB1Q6P1J6 1458 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 ICE1Q9Y2F5 2266 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 CBX1P83916 185 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 P3H4Q92791 437 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 F8W031 263 aaPredicted RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 GBP6Q6ZN66 633 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 LEO1Q8WVC0 666 aaPredicted RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 TACC3Q9Y6A5 838 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 PARP10Q53GL7 1025 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 SEC62Q99442 399 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 ATP8B2P98198 1209 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 BCRP11274 1271 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 KIF11P52732 1056 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 TYRO3Q06418 890 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 INTS8Q75QN2 995 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 IPO11Q9UI26 975 aaKnown RBP10.8□□□□□ -0.68
CUX1-203ENST00000360264 DEXIO95424 95 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 ARHGEF6Q15052 776 aa10.8□□□□□ -0.68
CUX1-203ENST00000360264 HS1BP3Q53T59 392 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 ZNF569Q5MCW4 686 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 RNF34Q969K3 372 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 DAPK3O43293 454 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 IDI1Q13907 227 aa10.79□□□□□ -0.68
CUX1-203ENST00000360264 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 GTF2A1P52655 376 aaPredicted RBP10.79□□□□□ -0.68
CUX1-203ENST00000360264 USP48Q86UV5 1035 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms