RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 H7C1D1 291 aa14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 PPP4CP60510 307 aa14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 NMIQ13287 307 aaPredicted RBP14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 ZBED3Q96IU2 234 aaPredicted RBP14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 FAM227BQ96M60 508 aa14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 PUS7LQ9H0K6 701 aaKnown RBP14.95□□□□□ -0.02
NIF3L1-201ENST00000359683 A0A0D9SFI3 127 aa14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 POTECB2RU33 542 aa14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 CFAP100Q494V2 611 aa14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 APOBEC3HQ6NTF7 200 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 CWC27Q6UX04 472 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 SEC62Q99442 399 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-201ENST00000359683 EPS15P42566 896 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 DLGAP5Q15398 846 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 RIOK1Q9BRS2 568 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 MYOZ2Q9NPC6 264 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
NIF3L1-201ENST00000359683 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 BAG3O95817 575 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 LMOD1P29536 600 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 SAMD7Q7Z3H4 446 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 PRMT6Q96LA8 375 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 M0R2C6 588 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 SPDYE6P0CI01 402 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 BTDP43251 543 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 RHBDL3P58872 404 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 DYNLL1P63167 89 aaKnown RBP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 STRBPQ96SI9 672 aaKnown RBP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 ESYT1Q9BSJ8 1104 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 IL25Q9H293 177 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 AATFQ9NY61 560 aaKnown RBP eCLIP14.92□□□□□ -0.02
NIF3L1-201ENST00000359683 RAD50Q92878 1312 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 WNT10BO00744 389 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 SGSM2O43147 1006 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 MBD4O95243 580 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 EGFRP00533 1210 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 NOL10Q9BSC4 688 aaKnown RBP14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 HACL1Q9UJ83 578 aa14.91□□□□□ -0.02
NIF3L1-201ENST00000359683 GPAA1O43292 621 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 PLCG2P16885 1265 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 CDC42EP5Q6NZY7 148 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 LCORLQ8N3X6 602 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 ARMT1Q9H993 441 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 USP40Q9NVE5 1235 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 ADAMTSL1Q8N6G6 1762 aa14.9□□□□□ -0.02
NIF3L1-201ENST00000359683 IQCA1LA6NCM1 817 aa14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 HIRAP54198 1017 aaPredicted RBP14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 KIF4BQ2VIQ3 1234 aa14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 NBPF9Q3BBW0 867 aa14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 TRPM4Q8TD43 1214 aa14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 TDRD3Q9H7E2 651 aaKnown RBP14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
NIF3L1-201ENST00000359683 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 POTEJP0CG39 1038 aa14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 EPHX2P34913 555 aa14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 MFAP1P55081 439 aaKnown RBP14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 GNAT2P19087 354 aa14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 USP50Q70EL3 339 aaPredicted RBP14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 CRNKL1Q9BZJ0 848 aaKnown RBP14.88□□□□□ -0.03
NIF3L1-201ENST00000359683 PATL2C9JE40 543 aaKnown RBP14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 PRKAB2O43741 272 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 MYO1BO43795 1136 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 WDHD1O75717 1129 aaPredicted RBP14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 TEX11Q8IYF3 940 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 SLC4A4Q9Y6R1 1079 aa14.87□□□□□ -0.03
NIF3L1-201ENST00000359683 RPAP1Q9BWH6 1393 aaPredicted RBP14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 GSG1L2A8MUP6 293 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 FOXP2O15409 715 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 VPS53Q5VIR6 699 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 FKBP1CQ5VVH2 108 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 PGAP2Q9UHJ9 254 aa14.86□□□□□ -0.03
NIF3L1-201ENST00000359683 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
NIF3L1-201ENST00000359683 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
NIF3L1-201ENST00000359683 PNMA8AQ86V59 439 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms