RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 NCOA5Q9HCD5 579 aaKnown RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 BRPF3Q9ULD4 1205 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 UQCRFS1P1P0C7P4 283 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 PSMA5P28066 241 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 GJB2P29033 226 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 CCT2P78371 535 aaKnown RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 ZNF772Q68DY9 489 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 LCORLQ8N3X6 602 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 DDX11Q96FC9 970 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 DSCC1Q9BVC3 393 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 TM6SF1Q9BZW5 370 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 PDGFDQ9GZP0 370 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATXN3-202ENST00000359366 RAI14Q9P0K7 980 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 A0A1B0GUL6 1792 aa6.03□□□□□ -1.44
ATXN3-202ENST00000359366 COL24A1Q17RW2 1714 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 RFX7Q2KHR2 1363 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 RTL9Q8NET4 1388 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 CLGNO14967 610 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 DYNLL1P63167 89 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 CTDSPL2Q05D32 466 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 FERMT3Q86UX7 667 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 TBC1D10CQ8IV04 446 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SMAP1Q8IYB5 467 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 ZNF384Q8TF68 577 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SDR42E1Q8WUS8 393 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SECISBP2LQ93073 1101 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 AIDAQ96BJ3 306 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 CWC22Q9HCG8 908 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SMC3Q9UQE7 1217 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 TACC3Q9Y6A5 838 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 ARAP2Q8WZ64 1704 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 CYP2D7A0A087X1C5 515 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 VPS37CA5D8V6 355 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 POLRMTO00411 1230 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 ZFYP08048 801 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 RXRAP19793 462 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SYT1P21579 422 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 CYP7A1P22680 504 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 PRDX5P30044 214 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 NUCB2P80303 420 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 EN1Q05925 392 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 MAP3K12Q12852 859 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 TTF1Q15361 905 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SLC27A3Q5K4L6 730 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 TAF3Q5VWG9 929 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 FAM173BQ6P4H8 233 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 RPGRQ92834 1020 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 GBP4Q96PP9 640 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 SENP2Q9HC62 589 aa6.02□□□□□ -1.45
ATXN3-202ENST00000359366 EPB41L4AQ9HCS5 686 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 NSFL1CQ9UNZ2 370 aaKnown RBP6.02□□□□□ -1.45
ATXN3-202ENST00000359366 MYH13Q9UKX3 1938 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 ZNF804BA4D1E1 1349 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 CLSTN1O94985 981 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 BRD1O95696 1058 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 TPM2P07951 284 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 GPSM2P81274 684 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 GRIK5Q16478 980 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 CAVIN4Q5BKX8 364 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 UTP14CQ5TAP6 766 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 FBXO41Q8TF61 875 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 ZNF512BQ96KM6 892 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 STRBPQ96SI9 672 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 RBM27Q9P2N5 1060 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 ZNF213O14771 459 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 MMP10P09238 476 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 HIBADHP31937 336 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 SCRN1Q12765 414 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 UBE4AQ14139 1066 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 UBE3CQ15386 1083 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 EZH2Q15910 746 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 IMMTQ16891 758 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 TSGA10IPQ3SY00 556 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 RRP12Q5JTH9 1297 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 CYB5R4Q7L1T6 521 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 DHX32Q7L7V1 743 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 TICAM2Q86XR7 235 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 CCDC144CPQ8IYA2 1237 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 SPOCK2Q92563 424 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 INTS4Q96HW7 963 aaKnown RBP6.01□□□□□ -1.45
ATXN3-202ENST00000359366 SLC4A4Q9Y6R1 1079 aa6.01□□□□□ -1.45
ATXN3-202ENST00000359366 BAZ2AQ9UIF9 1905 aaKnown RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 NEDD4P46934 1319 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 GSG1L2A8MUP6 293 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 B4E1Z4 1266 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 PRC1O43663 620 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 ANTXR2P58335 489 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 ST5P78524 1137 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 EXOSC10Q01780 885 aaKnown RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 GRAPQ13588 217 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 KRT32Q14532 448 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 LRRFIP1Q32MZ4 808 aaKnown RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 AXDND1Q5T1B0 1012 aaPredicted RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 ZSCAN25Q6NSZ9 544 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 DEFB132Q7Z7B7 95 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 GRAPLQ8TC17 118 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms