RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-201ENST00000359005 VIL1P09327 827 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 ADD2P35612 726 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 PHKA1P46020 1223 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 PTH1RQ03431 593 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 DPF2Q92785 391 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 EDC3Q96F86 508 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 GBP4Q96PP9 640 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-201ENST00000359005 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 MYH7P12883 1935 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 FGD1P98174 961 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 TBC1D10BQ4KMP7 808 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 EYA3Q99504 573 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF804BA4D1E1 1349 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
TRAPPC4-201ENST00000359005 MAST3O60307 1309 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 TRDNQ13061 729 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF589Q86UQ0 364 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 NEK1Q96PY6 1258 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 GMLQ99445 158 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 H7C1D1 291 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 BCAMP50895 628 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 RASGRF1Q13972 1273 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 C15orf52Q6ZUT6 534 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 FBXO33Q7Z6M2 555 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 IL25Q9H293 177 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 SCN4AP35499 1836 aa12.74□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 IRS2Q9Y4H2 1338 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF213O14771 459 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 GPAA1O43292 621 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 APPP05067 770 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 PDE6AP16499 860 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 RPS6KB1P23443 525 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 GSTO1P78417 241 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 CUL4AQ13619 759 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 SCARF1Q14162 830 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 WDR66Q8TBY9 1149 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
TRAPPC4-201ENST00000359005 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 NT5C2P49902 561 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 ZNF280AP59817 542 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 ALX1Q15699 326 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 DEFB115Q30KQ5 88 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 MAGEB6Q8N7X4 407 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 TTC14Q96N46 770 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 SEC62Q99442 399 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
TRAPPC4-201ENST00000359005 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 M0R2C6 588 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 FOXN1O15353 648 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 PDCP20941 246 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 RPS12P25398 132 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 AK2P54819 239 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 NFKBIBQ15653 356 aa12.71□□□□□ -0.37
TRAPPC4-201ENST00000359005 DACT2Q5SW24 774 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms