RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GNGT1P63211 74 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 DHX32Q7L7V1 743 aaKnown RBP9.82□□□□□ -0.84
COL6A6-201ENST00000358511 MYD88Q99836 296 aa9.82□□□□□ -0.84
COL6A6-201ENST00000358511 PLXNC1O60486 1568 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 KIF1CO43896 1103 aaKnown RBP9.81□□□□□ -0.84
COL6A6-201ENST00000358511 ZNF131P52739 623 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 RTL9Q8NET4 1388 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 LRRD1A4D1F6 860 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 ZNF202O95125 648 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 NLRP12P59046 1061 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 VSIG1Q86XK7 387 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 RPUSD2Q8IZ73 545 aaKnown RBP9.81□□□□□ -0.84
COL6A6-201ENST00000358511 NUP58Q9BVL2 599 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 EHMT1Q9H9B1 1298 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 KRT2P35908 639 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 STX17P56962 302 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 ICE2Q659A1 982 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 CALML3P27482 149 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 PPP1R2P41236 205 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 NMIQ13287 307 aaPredicted RBP9.81□□□□□ -0.84
COL6A6-201ENST00000358511 VWA3BQ502W6 1294 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 UBL4BQ8N7F7 174 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 FAM204AQ9H8W3 233 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
COL6A6-201ENST00000358511 ABCA10Q8WWZ4 1543 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 PHLPP2Q6ZVD8 1323 aa9.81□□□□□ -0.84
COL6A6-201ENST00000358511 IRX4P78413 519 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 C16orf71Q8IYS4 520 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 MLKLQ8NB16 471 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 PABPN1LA6NDY0 278 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 BRD1O95696 1058 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 N4BP2L2Q92802 583 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 KAT14Q9H8E8 782 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 PPANQ9NQ55 473 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 SMIM24O75264 130 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 IFIT1BQ5T764 474 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 IQCDQ96DY2 449 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 KCNH3Q9ULD8 1083 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 STAG1Q8WVM7 1258 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 DUOX2Q9NRD8 1548 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 RPS6KB1P23443 525 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 ATP8B2P98198 1209 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 TERF2Q15554 542 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC51Q96ER9 411 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 JPH2Q9BR39 696 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 XPO4Q9C0E2 1151 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 ETF1P62495 437 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 NUF2Q9BZD4 464 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 LARSQ9P2J5 1176 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 A0A087WUV0 522 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 TPD52P55327 224 aaPredicted RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC170Q8IYT3 715 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 STK38LQ9Y2H1 464 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 BRD2P25440 801 aaKnown RBP9.8□□□□□ -0.84
COL6A6-201ENST00000358511 MTX1Q13505 466 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 KRT71Q3SY84 523 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 UBE3BQ7Z3V4 1068 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 ESR2Q92731 530 aa9.8□□□□□ -0.84
COL6A6-201ENST00000358511 MAGEA9P43362 315 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 ZNF444Q8N0Y2 327 aaPredicted RBP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 ABCC2Q92887 1545 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PI4KAP2A4QPH2 592 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 STARD3NLO95772 234 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 ESCO1Q5FWF5 840 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 SND1Q7KZF4 910 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PI4KAP1Q8N8J0 262 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 CSRNP2Q9H175 543 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 KDM5CP41229 1560 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 CLTAP09496 248 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PFDN1O60925 122 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 CCT5P48643 541 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 TRIM58Q8NG06 486 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 SYNCQ9H7C4 482 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 CERS3Q8IU89 383 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 VPS52Q8N1B4 723 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 IFIH1Q9BYX4 1025 aaKnown RBP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 RAB17Q9H0T7 212 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 ANO1Q5XXA6 986 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 MMS22LQ6ZRQ5 1243 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 PPP2R5AQ15172 486 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 CCDC14Q49A88 953 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 RILPL1Q5EBL4 403 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 RGS22Q8NE09 1264 aa9.79□□□□□ -0.84
COL6A6-201ENST00000358511 TACO1Q9BSH4 297 aaKnown RBP9.79□□□□□ -0.84
COL6A6-201ENST00000358511 SYNMO15061 1565 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 I3L4J1 428 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 CTNNA1P35221 906 aaKnown RBP9.78□□□□□ -0.84
COL6A6-201ENST00000358511 LRMPQ12912 555 aa9.78□□□□□ -0.84
COL6A6-201ENST00000358511 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms