RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL11A1-202ENST00000358392 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 TSNAXIP1Q2TAA8 658 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 EXOC5O00471 708 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 TBC1D7Q9P0N9 293 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 MAP7Q14244 749 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 LETM2Q2VYF4 491 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 DTNBO60941 627 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 PPME1Q9Y570 386 aa12.51□□□□□ -0.41
COL11A1-202ENST00000358392 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 PDE1AP54750 535 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 RAPGEF3O95398 923 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 CAMSAP2Q08AD1 1489 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 GIPC1O14908 333 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 CETN3O15182 167 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 STX10O60499 249 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 CPA1P15085 419 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 ANKRD42Q8N9B4 389 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 KIFAP3Q92845 792 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 ASIC3Q9UHC3 531 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 TPX2Q9ULW0 747 aaKnown RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 CNGA4Q8IV77 575 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 RNF10Q8N5U6 811 aaKnown RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 BAIAP2L1Q9UHR4 511 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
COL11A1-202ENST00000358392 ANKRD13DQ6ZTN6 518 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 SESN3P58005 492 aa12.5□□□□□ -0.41
COL11A1-202ENST00000358392 AQRO60306 1485 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL11A1-202ENST00000358392 PDE4DQ08499 809 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 OPHN1O60890 802 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 SMIM24O75264 130 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 BSPRYQ5W0U4 402 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 GPCPD1Q9NPB8 672 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 SLC39A6Q13433 755 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 CXorf38Q8TB03 319 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 MYO1AQ9UBC5 1043 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 USH1CQ9Y6N9 552 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 BAG2O95816 211 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 OAS2P29728 719 aaKnown RBP12.49□□□□□ -0.41
COL11A1-202ENST00000358392 GNAQP50148 359 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 EIF6P56537 245 aaKnown RBP12.49□□□□□ -0.41
COL11A1-202ENST00000358392 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
COL11A1-202ENST00000358392 GOLGA6BA6NDN3 693 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 I3L4J1 428 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CYP26C1Q6V0L0 522 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 IFT20Q8IY31 132 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 PTPROQ16827 1216 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 VCXQ9H320 206 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
COL11A1-202ENST00000358392 KRT15P19012 456 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 RUFY3Q7L099 469 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 SUPT6HQ7KZ85 1726 aaKnown RBP12.48□□□□□ -0.41
COL11A1-202ENST00000358392 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-202ENST00000358392 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CEP104O60308 925 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 UBL4BQ8N7F7 174 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 ERO1AQ96HE7 468 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 RAB3GAP1Q15042 981 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CEP128Q6ZU80 1094 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
COL11A1-202ENST00000358392 CALML3P27482 149 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 CCDC38Q502W7 563 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 MYL5Q02045 173 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 LCA5Q86VQ0 697 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 AFAP1L2Q8N4X5 818 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms