RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TRPM4Q8TD43 1214 aa18.37■□□□□ 0.53
TPM1-206ENST00000358278 WNT10BO00744 389 aa18.36■□□□□ 0.53
TPM1-206ENST00000358278 PRMT6Q96LA8 375 aaPredicted RBP18.36■□□□□ 0.53
TPM1-206ENST00000358278 TAF1DQ9H5J8 278 aaPredicted RBP18.36■□□□□ 0.53
TPM1-206ENST00000358278 NMRK2Q9NPI5 230 aa18.36■□□□□ 0.53
TPM1-206ENST00000358278 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 MAGEB6P1A0A0J9YX57 407 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 POTECB2RU33 542 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 NBPF9Q3BBW0 867 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 ZMYM1Q5SVZ6 1142 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 APOBEC3HQ6NTF7 200 aaKnown RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 GPBP1L1Q9HC44 474 aaPredicted RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 A0A0D9SFI3 127 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 PLCG2P16885 1265 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 EAPPQ56P03 285 aaPredicted RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 FAM227BQ96M60 508 aa18.35■□□□□ 0.53
TPM1-206ENST00000358278 PUS7LQ9H0K6 701 aaKnown RBP18.35■□□□□ 0.53
TPM1-206ENST00000358278 CDC45O75419 566 aa18.34■□□□□ 0.53
TPM1-206ENST00000358278 MBD4O95243 580 aa18.34■□□□□ 0.53
TPM1-206ENST00000358278 CHMLP26374 656 aa18.34■□□□□ 0.53
TPM1-206ENST00000358278 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
TPM1-206ENST00000358278 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
TPM1-206ENST00000358278 SEC62Q99442 399 aaKnown RBP18.34■□□□□ 0.53
TPM1-206ENST00000358278 TDRD3Q9H7E2 651 aaKnown RBP18.34■□□□□ 0.53
TPM1-206ENST00000358278 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
TPM1-206ENST00000358278 M0R2C6 588 aa18.33■□□□□ 0.52
TPM1-206ENST00000358278 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
TPM1-206ENST00000358278 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
TPM1-206ENST00000358278 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
TPM1-206ENST00000358278 USP40Q9NVE5 1235 aa18.33■□□□□ 0.52
TPM1-206ENST00000358278 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 PPP4CP60510 307 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 CDC42EP5Q6NZY7 148 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 LCORLQ8N3X6 602 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 RIOK1Q9BRS2 568 aaKnown RBP18.32■□□□□ 0.52
TPM1-206ENST00000358278 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 GPAA1O43292 621 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
TPM1-206ENST00000358278 SPDYE2Q495Y8 402 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
TPM1-206ENST00000358278 SH3RF3Q8TEJ3 882 aaPredicted RBP18.32■□□□□ 0.52
TPM1-206ENST00000358278 RHBDL3P58872 404 aa18.31■□□□□ 0.52
TPM1-206ENST00000358278 CRNKL1Q9BZJ0 848 aaKnown RBP18.31■□□□□ 0.52
TPM1-206ENST00000358278 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
TPM1-206ENST00000358278 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
TPM1-206ENST00000358278 RAD50Q92878 1312 aa18.31■□□□□ 0.52
TPM1-206ENST00000358278 LAMB1P07942 1786 aa18.3■□□□□ 0.52
TPM1-206ENST00000358278 CACNB3P54284 484 aa18.3■□□□□ 0.52
TPM1-206ENST00000358278 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
TPM1-206ENST00000358278 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
TPM1-206ENST00000358278 CLEC11AQ9Y240 323 aa18.3■□□□□ 0.52
TPM1-206ENST00000358278 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
TPM1-206ENST00000358278 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
TPM1-206ENST00000358278 MYH8P13535 1937 aa18.29■□□□□ 0.52
TPM1-206ENST00000358278 ANGEL2Q5VTE6 544 aaKnown RBP18.29■□□□□ 0.52
TPM1-206ENST00000358278 CCDC171Q6TFL3 1326 aa18.29■□□□□ 0.52
TPM1-206ENST00000358278 USP5P45974 858 aa18.29■□□□□ 0.52
TPM1-206ENST00000358278 PICALMQ13492 652 aa18.29■□□□□ 0.52
TPM1-206ENST00000358278 ZNF589Q86UQ0 364 aaPredicted RBP18.29■□□□□ 0.52
TPM1-206ENST00000358278 APOBEC3FQ8IUX4 373 aaKnown RBP18.29■□□□□ 0.52
TPM1-206ENST00000358278 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
TPM1-206ENST00000358278 PITPNM2Q9BZ72 1349 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 TCP10L2B9ZVM9 353 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 GNAT2P19087 354 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 TNFAIP1Q13829 316 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 TGFBRAP1Q8WUH2 860 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
TPM1-206ENST00000358278 STRBPQ96SI9 672 aaKnown RBP18.28■□□□□ 0.52
TPM1-206ENST00000358278 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
TPM1-206ENST00000358278 WDHD1O75717 1129 aaPredicted RBP18.27■□□□□ 0.52
TPM1-206ENST00000358278 POTEIP0CG38 1075 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 POTEJP0CG39 1038 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
TPM1-206ENST00000358278 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 ESYT1Q9BSJ8 1104 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 LAMA4Q16363 1823 aa18.27■□□□□ 0.52
TPM1-206ENST00000358278 SGSM2O43147 1006 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 APPP05067 770 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 TNNI2P48788 182 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 NFIAQ12857 509 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 IL25Q9H293 177 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
TPM1-206ENST00000358278 FLT1P17948 1338 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 PRKAB2O43741 272 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 TCP10Q12799 353 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 FKBP1CQ5VVH2 108 aa18.26■□□□□ 0.51
TPM1-206ENST00000358278 SULF1Q8IWU6 871 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms