RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 SNX1Q13596 522 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 SARM1Q6SZW1 724 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
PSEN1-202ENST00000357710 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 ERICH2A1L162 156 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 VCAM1P19320 739 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 GJA8P48165 433 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 SMTNP53814 917 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 CCDC15Q0P6D6 951 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
PSEN1-202ENST00000357710 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TSGA10Q9BZW7 698 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 TRIM5Q9C035 493 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
PSEN1-202ENST00000357710 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 SASH1O94885 1247 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 CD248Q9HCU0 757 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 FERP16591 822 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 RANBP1P43487 201 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 EVCP57679 992 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 LRRC23Q53EV4 343 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 POLR3CQ9BUI4 534 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-202ENST00000357710 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
PSEN1-202ENST00000357710 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 ZNF24P17028 368 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 CUL4AQ13619 759 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 GET4Q7L5D6 327 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-202ENST00000357710 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
PSEN1-202ENST00000357710 CCDC114Q96M63 670 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 ANKRD65E5RJM6 399 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 TUBBP07437 444 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
PSEN1-202ENST00000357710 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 YIPF2Q9BWQ6 316 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
PSEN1-202ENST00000357710 DLG5Q8TDM6 1919 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 A6NNZ2 444 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 E2F6O75461 281 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 KIAA0754O94854 1291 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 GBP2P32456 591 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 USP5P45974 858 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 CCZ1BP86790 482 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 CCZ1P86791 482 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 CAPRIN2Q6IMN6 1127 aaKnown RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 EYA1Q99502 592 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 FAN1Q9Y2M0 1017 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 CPDO75976 1380 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 SESN3P58005 492 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 IFT88Q13099 833 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 SNCBQ16143 134 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
PSEN1-202ENST00000357710 CORO1CQ9ULV4 474 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-202ENST00000357710 GOLGA6L9A6NEM1 432 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 DRP2Q13474 957 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 MTHFD1LQ6UB35 978 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 ZBED6P86452 979 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC80Q76M96 950 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 RSRC2Q7L4I2 434 aaKnown RBP12.82□□□□□ -0.36
PSEN1-202ENST00000357710 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 COL18A1P39060 1754 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
PSEN1-202ENST00000357710 YY1P25490 414 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PSMC1P62191 440 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PRPF4BQ13523 1007 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 KCNB1Q14721 858 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 ARMC3Q5W041 872 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 DDX19BQ9UMR2 479 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms