RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 VAV2P52735 878 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
COL9A1-202ENST00000357250 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 SLC27A2O14975 620 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 CUTAO60888 179 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 HSPA4P34932 840 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 TNNC1P63316 161 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 UBXN1Q04323 297 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 PUM3Q15397 648 aaKnown RBP13.25□□□□□ -0.29
COL9A1-202ENST00000357250 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
COL9A1-202ENST00000357250 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
COL9A1-202ENST00000357250 CCDC65Q8IXS2 484 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 KBTBD3Q8NAB2 608 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-202ENST00000357250 CLSTN2Q9H4D0 955 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 SH2D4AQ9H788 454 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-202ENST00000357250 FAM13AO94988 1023 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-202ENST00000357250 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 PPM1EQ8WY54 764 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 TERF1P54274 439 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
COL9A1-202ENST00000357250 V9GYY5 206 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-202ENST00000357250 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 A6NNZ2 444 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 TUBB8Q3ZCM7 444 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
COL9A1-202ENST00000357250 ABCC3O15438 1527 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 PHACTR2O75167 634 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 KIF4AO95239 1232 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 PTGS1P23219 599 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 SNX14Q9Y5W7 946 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 HECW2Q9P2P5 1572 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 LIG1P18858 919 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 CCDC129Q6ZRS4 1044 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 SV2BQ7L1I2 683 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 EDC3Q96F86 508 aaKnown RBP13.23□□□□□ -0.29
COL9A1-202ENST00000357250 BAG1Q99933 345 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-202ENST00000357250 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
COL9A1-202ENST00000357250 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
COL9A1-202ENST00000357250 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 IQCDQ96DY2 449 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 MYOM2P54296 1465 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 PDE8AO60658 829 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 MBD4O95243 580 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
COL9A1-202ENST00000357250 TNNI2P48788 182 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 SYNCQ9H7C4 482 aa13.23□□□□□ -0.29
COL9A1-202ENST00000357250 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 MCM6Q14566 821 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 PROSER3Q2NL68 480 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 ANKS4BQ8N8V4 417 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
COL9A1-202ENST00000357250 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
COL9A1-202ENST00000357250 USP44Q9H0E7 712 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 MTRF1LQ9UGC7 380 aaKnown RBP13.22□□□□□ -0.29
COL9A1-202ENST00000357250 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL9A1-202ENST00000357250 CLTCL1P53675 1640 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL9A1-202ENST00000357250 MAST3O60307 1309 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
COL9A1-202ENST00000357250 FERP16591 822 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 LMTK3Q96Q04 1460 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
COL9A1-202ENST00000357250 MCM7P33993 719 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.29
COL9A1-202ENST00000357250 KCNH3Q9ULD8 1083 aa13.21□□□□□ -0.29
COL9A1-202ENST00000357250 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.3
COL9A1-202ENST00000357250 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.3
COL9A1-202ENST00000357250 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.3
COL9A1-202ENST00000357250 CEP83Q9Y592 693 aa13.21□□□□□ -0.3
COL9A1-202ENST00000357250 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-202ENST00000357250 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 MIGA1Q8NAN2 632 aa13.2□□□□□ -0.3
COL9A1-202ENST00000357250 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms