RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 PLIN2Q99541 437 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
CHD4-201ENST00000357008 IFT20Q8IY31 132 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 CFAP57Q96MR6 1250 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 MCM9Q9NXL9 1143 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 FANCAO15360 1455 aa16.66■□□□□ 0.26
CHD4-201ENST00000357008 TRAF5O00463 557 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
CHD4-201ENST00000357008 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
CHD4-201ENST00000357008 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 PER1O15534 1290 aaPredicted RBP16.65■□□□□ 0.26
CHD4-201ENST00000357008 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 SSX2IPQ9Y2D8 614 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
CHD4-201ENST00000357008 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 PLCG2P16885 1265 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
CHD4-201ENST00000357008 KIAA1524Q8TCG1 905 aa16.65■□□□□ 0.26
CHD4-201ENST00000357008 FAM173BQ6P4H8 233 aa16.64■□□□□ 0.26
CHD4-201ENST00000357008 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 ADAMTS2O95450 1211 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 RFC4P35249 363 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 CEP128Q6ZU80 1094 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 ZNF202O95125 648 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 ATP11AP98196 1134 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 RAB3IL1Q8TBN0 382 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■■□ 24.8
CHD4-201ENST00000357008 TXNDC16Q9P2K2 825 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 MAP7D1Q3KQU3 841 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 STMN2Q93045 179 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 TCHPQ9BT92 498 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 ST5P78524 1137 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 PDE4DQ08499 809 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 RUFY4Q6ZNE9 571 aa16.64■□□□□ 0.25
CHD4-201ENST00000357008 SECISBP2LQ93073 1101 aaKnown RBP16.64■□□□□ 0.25
CHD4-201ENST00000357008 DENND4BO75064 1496 aaPredicted RBP16.63■□□□□ 0.25
CHD4-201ENST00000357008 APBB1IPQ7Z5R6 666 aaPredicted RBP16.63■□□□□ 0.25
CHD4-201ENST00000357008 CROCCP2Q86T23 111 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 PSMD1Q99460 953 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 ARHGAP25P42331 645 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 NOX5Q96PH1 765 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 GOLGA6BA6NDN3 693 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHD4-201ENST00000357008 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
CHD4-201ENST00000357008 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 PAK1Q13153 545 aa16.63■□□□□ 0.25
CHD4-201ENST00000357008 CSGALNACT2Q8N6G5 542 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 DUOX2Q9NRD8 1548 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 BRD1O95696 1058 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 UTP11Q9Y3A2 253 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 NFE2L3Q9Y4A8 694 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 OAS2P29728 719 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 PICALMQ13492 652 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
CHD4-201ENST00000357008 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 NPATQ14207 1427 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 DDX21Q9NR30 783 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHD4-201ENST00000357008 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHD4-201ENST00000357008 FRMD4BQ9Y2L6 1034 aa16.62■□□□□ 0.25
CHD4-201ENST00000357008 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 MBD4O95243 580 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 B4E1Z4 1266 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 KRT9P35527 623 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 LETM2Q2VYF4 491 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 ZNF500O60304 480 aaPredicted RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 NOL3O60936 208 aaKnown RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 CIB2O75838 187 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 PSMC4P43686 418 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 INF2Q27J81 1249 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 G2E3Q7L622 706 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 DIS3L2Q8IYB7 885 aaKnown RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 NCOA5Q9HCD5 579 aaKnown RBP16.61■□□□□ 0.25
CHD4-201ENST00000357008 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
CHD4-201ENST00000357008 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms