RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SLC4A8Q2Y0W8 1093 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
COLCA1-201ENST00000355430 CEP152O94986 1710 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 GNAT2P19087 354 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 HELBQ8NG08 1087 aaPredicted RBP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 GTF3C6Q969F1 213 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ELF2Q15723 593 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 RTN1Q16799 776 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 MAP9Q49MG5 647 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ANKARQ7Z5J8 1434 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 IQSEC2Q5JU85 1478 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 GOLGA6L10A6NI86 522 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ARHGEF25Q86VW2 580 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 EAF2Q96CJ1 260 aaPredicted RBP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 KRT23Q9C075 422 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ARFGAP3Q9NP61 516 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 N4BP3O15049 544 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 KIAA0754O94854 1291 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 TUBB4AP04350 444 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 TXLNBQ8N3L3 684 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ZBTB9Q96C00 473 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ZFP91Q96JP5 570 aaPredicted RBP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 SRRTQ9BXP5 876 aaKnown RBP14.03□□□□□ -0.16
COLCA1-201ENST00000355430 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
COLCA1-201ENST00000355430 ITGA6P23229 1130 aa14.02□□□□□ -0.16
COLCA1-201ENST00000355430 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.16
COLCA1-201ENST00000355430 SPATA31A3Q5VYP0 1347 aa14.02□□□□□ -0.16
COLCA1-201ENST00000355430 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 ELP1O95163 1332 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 FKBP15Q5T1M5 1219 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 CERS3Q8IU89 383 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 DHX58Q96C10 678 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.17
COLCA1-201ENST00000355430 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.17
COLCA1-201ENST00000355430 LARGE1O95461 756 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 GCKRQ14397 625 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 RRAGBQ5VZM2 374 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 ESR2Q92731 530 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 CNNM2Q9H8M5 875 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 MYL5Q02045 173 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 PLS1Q14651 629 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
COLCA1-201ENST00000355430 KDRP35968 1356 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 ANO1Q5XXA6 986 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 A0A1B0GUL7 405 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
COLCA1-201ENST00000355430 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
COLCA1-201ENST00000355430 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 MCM3P25205 808 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 KBTBD3Q8NAB2 608 aa14.01□□□□□ -0.17
COLCA1-201ENST00000355430 STX17P56962 302 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 WDR66Q8TBY9 1149 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 ZDHHC9Q9Y397 364 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 ADGRB3O60242 1522 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 CCDC175P0C221 793 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 RDXP35241 583 aaKnown RBP14□□□□□ -0.17
COLCA1-201ENST00000355430 FANCCQ00597 558 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 MCM6Q14566 821 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 GOLGA1Q92805 767 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
COLCA1-201ENST00000355430 LZTFL1Q9NQ48 299 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 MED14O60244 1454 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 PUM3Q15397 648 aaKnown RBP14□□□□□ -0.17
COLCA1-201ENST00000355430 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 NRBP1Q9UHY1 535 aa14□□□□□ -0.17
COLCA1-201ENST00000355430 DESP17661 470 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 GNAQP50148 359 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 DNA2P51530 1060 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 MYO6Q9UM54 1294 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 MTIF2P46199 727 aaKnown RBP13.99□□□□□ -0.17
COLCA1-201ENST00000355430 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 ATP5JP18859 108 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 TNFAIP1Q13829 316 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 MCM9Q9NXL9 1143 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
COLCA1-201ENST00000355430 ZNF202O95125 648 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
COLCA1-201ENST00000355430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.17
COLCA1-201ENST00000355430 PRR36Q9H6K5 1346 aa13.99□□□□□ -0.17
COLCA1-201ENST00000355430 NEURL1BA8MQ27 555 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 EYA2O00167 538 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 HSPA1LP34931 641 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 NLRP12P59046 1061 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 DLGAP5Q15398 846 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 BAG1Q99933 345 aaPredicted RBP13.98□□□□□ -0.17
COLCA1-201ENST00000355430 E7EWF7 191 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 ABCA9Q8IUA7 1624 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
COLCA1-201ENST00000355430 PPP1R12BO60237 982 aaPredicted RBP13.98□□□□□ -0.17
COLCA1-201ENST00000355430 GIGYF1O75420 1035 aaPredicted RBP13.98□□□□□ -0.17
COLCA1-201ENST00000355430 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms