RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 CYP2D7A0A087X1C5 515 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 RPS6KA4O75676 772 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 PLCG2P16885 1265 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 TFAP4Q01664 338 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 ZNF772Q68DY9 489 aaPredicted RBP14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 MYO5BQ9ULV0 1848 aa14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 KCNJ14Q9UNX9 436 aa14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 TNNI2P48788 182 aa14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 CEP89Q96ST8 783 aa14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 GPHNQ9NQX3 736 aaPredicted RBP14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
PCDHB11-201ENST00000354757 A0A1B0GVL5 298 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 M0R2C6 588 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 SYKP43405 635 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 ITPK1Q13572 414 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 MST1RQ04912 1400 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 MAP2P11137 1827 aaKnown RBP14.21□□□□□ -0.14
PCDHB11-201ENST00000354757 ARHGEF28Q8N1W1 1705 aaKnown RBP14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 MCAMP43121 646 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 AKNAD1Q5T1N1 836 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 MAP4K1Q92918 833 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 STIM1Q13586 685 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 SCARF1Q14162 830 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 PDIA6Q15084 440 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 DDX19AQ9NUU7 478 aaKnown RBP14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 SPTLC2O15270 562 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 ERCC4Q92889 916 aaPredicted RBP14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 PIH1D3Q9NQM4 214 aaKnown RBP14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 COL15A1P39059 1388 aa14.2□□□□□ -0.14
PCDHB11-201ENST00000354757 PATL2C9JE40 543 aaKnown RBP14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 MCM7P33993 719 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 JCADQ9P266 1359 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 GADD45BO75293 160 aaPredicted RBP14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 CIAO1O76071 339 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 PPARAQ07869 468 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 GAS2L3Q86XJ1 694 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 ANO10Q9NW15 660 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 UBE4AQ14139 1066 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 ISCA1Q9BUE6 129 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 USP40Q9NVE5 1235 aa14.19□□□□□ -0.14
PCDHB11-201ENST00000354757 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 CUL5Q93034 780 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 SSH2Q76I76 1423 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 MEGF6O75095 1541 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 MTX1Q13505 466 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 DHX58Q96C10 678 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 TRIM75PA6NK02 468 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 PDE6BP35913 854 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 ZNF174Q15697 407 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 LCORLQ8N3X6 602 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 NARFQ9UHQ1 456 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 SAMM50Q9Y512 469 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 CEMIPQ8WUJ3 1361 aa14.18□□□□□ -0.14
PCDHB11-201ENST00000354757 LARGE1O95461 756 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 FOXO4P98177 505 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 TMEM87BQ96K49 555 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 PRDX5P30044 214 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 VPS54Q9P1Q0 977 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 IQSEC2Q5JU85 1478 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 LIG1P18858 919 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 EN1Q05925 392 aaPredicted RBP14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 ZNF830Q96NB3 372 aaPredicted RBP14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
PCDHB11-201ENST00000354757 PPFIBP1Q86W92 1011 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 BTDP43251 543 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 NFIXQ14938 502 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 ANO6Q4KMQ2 910 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 DACH1Q9UI36 760 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 GNAQP50148 359 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 PLS1Q14651 629 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 TMEM266Q2M3C6 531 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 ZNF408Q9H9D4 720 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 TNKSO95271 1327 aa14.16□□□□□ -0.14
PCDHB11-201ENST00000354757 FSD2A1L4K1 749 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 EIF5P55010 431 aaKnown RBP14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 KCNG4Q8TDN1 519 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 PXDNQ92626 1479 aa14.15□□□□□ -0.14
PCDHB11-201ENST00000354757 CLRN2A0PK11 232 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms