RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NRDCO43847 1150 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 STK10O94804 968 aaKnown RBP12.52□□□□□ -0.4
SND1-201ENST00000354725 MAGEA9P43362 315 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 TTC30AQ86WT1 665 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.4
SND1-201ENST00000354725 RMI1Q9H9A7 625 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 SMTNL1A8MU46 457 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 TEX35Q5T0J7 233 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
SND1-201ENST00000354725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
SND1-201ENST00000354725 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
SND1-201ENST00000354725 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
SND1-201ENST00000354725 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
SND1-201ENST00000354725 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
SND1-201ENST00000354725 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
SND1-201ENST00000354725 KCNF1Q9H3M0 494 aa12.51□□□□□ -0.41
SND1-201ENST00000354725 ECHDC1Q9NTX5 307 aa12.51□□□□□ -0.41
SND1-201ENST00000354725 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 ANKRD31Q8N7Z5 1873 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 ME3Q16798 604 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 ANKRD23Q86SG2 305 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 CTAGE5O15320 804 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 NAT1P18440 290 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 ADCY5O95622 1261 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 GJB2P29033 226 aa12.5□□□□□ -0.41
SND1-201ENST00000354725 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
SND1-201ENST00000354725 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 SASH1O94885 1247 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 IPO7O95373 1038 aaKnown RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 PUF60Q9UHX1 559 aaKnown RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 RPS6KA4O75676 772 aa12.49□□□□□ -0.41
SND1-201ENST00000354725 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
SND1-201ENST00000354725 E2F5Q15329 346 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 LONRF3Q496Y0 759 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 RUFY2Q8WXA3 655 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 IQSEC3Q9UPP2 1182 aaPredicted RBP12.48□□□□□ -0.41
SND1-201ENST00000354725 CPA1P15085 419 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 FBXO18Q8NFZ0 1043 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
SND1-201ENST00000354725 NAT2P11245 290 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 FBXO38Q6PIJ6 1188 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 PDRG1Q9NUG6 133 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 SMC3Q9UQE7 1217 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 COQ9O75208 318 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 NUCKS1Q9H1E3 243 aaKnown RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 GOLGB1Q14789 3259 aaKnown RBP12.47□□□□□ -0.41
SND1-201ENST00000354725 ECEL1O95672 775 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 PAX7P23759 505 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
SND1-201ENST00000354725 SLC27A2O14975 620 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
SND1-201ENST00000354725 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 CYP46A1Q9Y6A2 500 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 HIP1O00291 1037 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 A1BGP04217 495 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 TPM3P06753 285 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.41
SND1-201ENST00000354725 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.41
SND1-201ENST00000354725 CREB3O43889 395 aa12.46□□□□□ -0.42
SND1-201ENST00000354725 CAND2O75155 1236 aa12.46□□□□□ -0.42
SND1-201ENST00000354725 CCDC83Q8IWF9 413 aa12.46□□□□□ -0.42
SND1-201ENST00000354725 CLASRPQ8N2M8 674 aaKnown RBP12.46□□□□□ -0.42
SND1-201ENST00000354725 GOLGA5Q8TBA6 731 aa12.46□□□□□ -0.42
SND1-201ENST00000354725 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms