RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 DPF2Q92785 391 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
CAPN9-202ENST00000354537 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
CAPN9-202ENST00000354537 TJP1Q07157 1748 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 TUBB2AQ13885 445 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
CAPN9-202ENST00000354537 TUBB2BQ9BVA1 445 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
CAPN9-202ENST00000354537 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
CAPN9-202ENST00000354537 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
CAPN9-202ENST00000354537 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 TRDNQ13061 729 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 LRRC24Q50LG9 513 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 KRT40Q6A162 431 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 MSL3Q8N5Y2 521 aaKnown RBP13.12□□□□□ -0.31
CAPN9-202ENST00000354537 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
CAPN9-202ENST00000354537 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 GPS2Q13227 327 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
CAPN9-202ENST00000354537 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CAPN9-202ENST00000354537 MEGF6O75095 1541 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 ATRNO75882 1429 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 ZNF18P17022 549 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 CABP4P57796 275 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 PSD3Q9NYI0 1048 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 KCNH3Q9ULD8 1083 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 RGPD5Q99666 1765 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 MARCKSP29966 332 aaPredicted RBP13.11□□□□□ -0.31
CAPN9-202ENST00000354537 TRIM29Q14134 588 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 SPECC1LQ69YQ0 1117 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 CNNM3Q8NE01 707 aa13.11□□□□□ -0.31
CAPN9-202ENST00000354537 ALS2Q96Q42 1657 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 FANCGO15287 622 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 PNOCQ13519 176 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 BRD3Q15059 726 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 WASF1Q92558 559 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 HAND2P61296 217 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 PPP2R3AQ06190 1150 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
CAPN9-202ENST00000354537 INTS13Q9NVM9 706 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 TMEM51Q9NW97 253 aa13.1□□□□□ -0.31
CAPN9-202ENST00000354537 NID2Q14112 1375 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 GPAA1O43292 621 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 GNG11P61952 73 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
CAPN9-202ENST00000354537 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
CAPN9-202ENST00000354537 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-202ENST00000354537 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 ZNF142P52746 1687 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-202ENST00000354537 COL18A1P39060 1754 aa13.09□□□□□ -0.31
CAPN9-202ENST00000354537 CCDC151A5D8V7 595 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms