RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CRNKL1Q9BZJ0 848 aaKnown RBP24.33■■□□□ 1.49
TRIM4-202ENST00000354241 TGFB2P61812 414 aa24.33■■□□□ 1.49
TRIM4-202ENST00000354241 SUPT20HQ8NEM7 779 aa24.33■■□□□ 1.49
TRIM4-202ENST00000354241 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
TRIM4-202ENST00000354241 TPCN1Q9ULQ1 816 aa24.33■■□□□ 1.49
TRIM4-202ENST00000354241 CCDC93Q567U6 631 aa24.32■■□□□ 1.48
TRIM4-202ENST00000354241 CHST3Q7LGC8 479 aa24.32■■□□□ 1.48
TRIM4-202ENST00000354241 NOL10Q9BSC4 688 aaKnown RBP24.32■■□□□ 1.48
TRIM4-202ENST00000354241 ANP32EQ9BTT0 268 aa24.32■■□□□ 1.48
TRIM4-202ENST00000354241 CIZ1Q9ULV3 898 aaPredicted RBP24.32■■□□□ 1.48
TRIM4-202ENST00000354241 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
TRIM4-202ENST00000354241 MROH7-TTC4A0A0A0MT08 1334 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 EXOSC10Q01780 885 aaKnown RBP24.31■■□□□ 1.48
TRIM4-202ENST00000354241 CTDSPL2Q05D32 466 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 TRDNQ13061 729 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 AOC3Q16853 763 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 INTS4Q96HW7 963 aaKnown RBP24.31■■□□□ 1.48
TRIM4-202ENST00000354241 CWC22Q9HCG8 908 aaKnown RBP24.31■■□□□ 1.48
TRIM4-202ENST00000354241 SH2B1Q9NRF2 756 aaPredicted RBP24.31■■□□□ 1.48
TRIM4-202ENST00000354241 PODNQ7Z5L7 613 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 KLHL34Q8N239 644 aa24.31■■□□□ 1.48
TRIM4-202ENST00000354241 ECE2O60344 883 aa24.3■■□□□ 1.48
TRIM4-202ENST00000354241 ME3Q16798 604 aa24.3■■□□□ 1.48
TRIM4-202ENST00000354241 GRIPAP1Q4V328 841 aa24.3■■□□□ 1.48
TRIM4-202ENST00000354241 MB21D2Q8IYB1 491 aaPredicted RBP24.3■■□□□ 1.48
TRIM4-202ENST00000354241 PIM2Q9P1W9 311 aa24.3■■□□□ 1.48
TRIM4-202ENST00000354241 BAG3O95817 575 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 RTKN2Q8IZC4 609 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 MINDY4BA8MYZ0 360 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 MCM5P33992 734 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 CCDC83Q8IWF9 413 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 SLF2Q8IX21 1173 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 BRF1Q92994 677 aa24.29■■□□□ 1.48
TRIM4-202ENST00000354241 PPIP5K2O43314 1243 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 PPARAQ07869 468 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 KIAA2012Q0VF49 1180 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 GIMAP6Q6P9H5 292 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 CERS5Q8N5B7 392 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 MXD3Q9BW11 206 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 SUGT1Q9Y2Z0 365 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 SCN9AQ15858 1988 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 NEDD4P46934 1319 aa24.28■■□□□ 1.48
TRIM4-202ENST00000354241 F8W031 263 aaPredicted RBP24.27■■□□□ 1.48
TRIM4-202ENST00000354241 PRC1O43663 620 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 BTDP43251 543 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 STK11IPQ8N1F8 1099 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 SH3RF3Q8TEJ3 882 aaPredicted RBP24.27■■□□□ 1.48
TRIM4-202ENST00000354241 SGIP1Q9BQI5 828 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 KCNQ5Q9NR82 932 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 LAMB1P07942 1786 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 PPP4CP60510 307 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 AKNAD1Q5T1N1 836 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 NECAB1Q8N987 351 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 DCP1AQ9NPI6 582 aaPredicted RBP24.27■■□□□ 1.48
TRIM4-202ENST00000354241 INCENPQ9NQS7 918 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 ATP8A2Q9NTI2 1148 aa24.27■■□□□ 1.48
TRIM4-202ENST00000354241 BRCA1P38398 1863 aaKnown RBP24.27■■□□□ 1.48
TRIM4-202ENST00000354241 B4E1Z4 1266 aa24.26■■□□□ 1.47
TRIM4-202ENST00000354241 MFSD6Q6ZSS7 791 aa24.26■■□□□ 1.47
TRIM4-202ENST00000354241 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.26■■□□□ 1.47
TRIM4-202ENST00000354241 USP5P45974 858 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 ANTXR2P58335 489 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 STK3Q13188 491 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 STAG1Q8WVM7 1258 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 AGXT2Q9BYV1 514 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 TTF2Q9UNY4 1162 aaKnown RBP24.25■■□□□ 1.47
TRIM4-202ENST00000354241 TACC3Q9Y6A5 838 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 CDK5RAP2Q96SN8 1893 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 APOBRQ0VD83 1088 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
TRIM4-202ENST00000354241 CTR9Q6PD62 1173 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 PSMD1Q99460 953 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 CNNM2Q9H8M5 875 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 TOMM22Q9NS69 142 aa24.25■■□□□ 1.47
TRIM4-202ENST00000354241 NAV1Q8NEY1 1877 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 ZNF646O15015 1829 aaPredicted RBP24.24■■□□□ 1.47
TRIM4-202ENST00000354241 CYP2D7A0A087X1C5 515 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 GPR75-ASB3A0A0A6YYF3 556 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 USP17L12C9JPN9 530 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 USP17L21D6R901 530 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 ST3GAL1Q11201 340 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 SOGA3Q5TF21 947 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 STRIP1Q5VSL9 837 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 NKX2-3Q8TAU0 364 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 FAM163AQ96GL9 167 aaPredicted RBP24.24■■□□□ 1.47
TRIM4-202ENST00000354241 RNF41Q9H4P4 317 aaPredicted RBP24.24■■□□□ 1.47
TRIM4-202ENST00000354241 ANAPC4Q9UJX5 808 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 GAKO14976 1311 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 WDR19Q8NEZ3 1342 aa24.24■■□□□ 1.47
TRIM4-202ENST00000354241 PTGER2P43116 358 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 NBR1Q14596 966 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 RRP12Q5JTH9 1297 aaKnown RBP24.23■■□□□ 1.47
TRIM4-202ENST00000354241 CYB5R4Q7L1T6 521 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 CERS3Q8IU89 383 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 KRT23Q9C075 422 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 GPHNQ9NQX3 736 aaPredicted RBP24.23■■□□□ 1.47
TRIM4-202ENST00000354241 NAP1L2Q9ULW6 460 aaPredicted RBP24.23■■□□□ 1.47
TRIM4-202ENST00000354241 SMC3Q9UQE7 1217 aa24.23■■□□□ 1.47
TRIM4-202ENST00000354241 USP17L3A6NCW0 530 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms