RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CLNS1AP54105 237 aaKnown RBP15.08■□□□□ 0
IFT88-202ENST00000351808 PIP4K2BP78356 416 aa15.08■□□□□ 0
IFT88-202ENST00000351808 RAD9BQ6WBX8 426 aa15.08■□□□□ 0
IFT88-202ENST00000351808 COG1Q8WTW3 980 aa15.08■□□□□ 0
IFT88-202ENST00000351808 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
IFT88-202ENST00000351808 RTN2O75298 545 aa15.07■□□□□ 0
IFT88-202ENST00000351808 ZMYND10O75800 440 aa15.07■□□□□ 0
IFT88-202ENST00000351808 MRPL12P52815 198 aaKnown RBP15.07■□□□□ 0
IFT88-202ENST00000351808 SPECC1LQ69YQ0 1117 aa15.07■□□□□ 0
IFT88-202ENST00000351808 LINC00301Q8NCQ3 95 aa15.07■□□□□ 0
IFT88-202ENST00000351808 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
IFT88-202ENST00000351808 MEFVO15553 781 aaPredicted RBP15.07■□□□□ 0
IFT88-202ENST00000351808 CTDNEP1O95476 244 aa15.07■□□□□ 0
IFT88-202ENST00000351808 ABL1P00519 1130 aa15.07■□□□□ 0
IFT88-202ENST00000351808 CCDC148Q8NFR7 591 aa15.07■□□□□ 0
IFT88-202ENST00000351808 CDK19Q9BWU1 502 aa15.07■□□□□ 0
IFT88-202ENST00000351808 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
IFT88-202ENST00000351808 ATP7BP35670 1465 aa15.07■□□□□ 0
IFT88-202ENST00000351808 NDUFAB1O14561 156 aa15.07■□□□□ 0
IFT88-202ENST00000351808 CCT2P78371 535 aaKnown RBP15.07■□□□□ 0
IFT88-202ENST00000351808 TUBB2AQ13885 445 aa15.07■□□□□ 0
IFT88-202ENST00000351808 CEP85LQ5SZL2 805 aa15.07■□□□□ 0
IFT88-202ENST00000351808 HOMEZQ8IX15 550 aa15.07■□□□□ 0
IFT88-202ENST00000351808 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
IFT88-202ENST00000351808 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
IFT88-202ENST00000351808 RTEL1Q9NZ71 1219 aa15.07■□□□□ 0
IFT88-202ENST00000351808 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
IFT88-202ENST00000351808 WHAMMP3Q1A5X7 153 aa15.06■□□□□ 0
IFT88-202ENST00000351808 NME9Q86XW9 330 aa15.06■□□□□ 0
IFT88-202ENST00000351808 CLASRPQ8N2M8 674 aaKnown RBP15.06■□□□□ 0
IFT88-202ENST00000351808 NEK1Q96PY6 1258 aa15.06■□□□□ 0
IFT88-202ENST00000351808 DDX20Q9UHI6 824 aaKnown RBP15.06■□□□□ 0
IFT88-202ENST00000351808 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.06■□□□□ 0
IFT88-202ENST00000351808 PPLO60437 1756 aa15.06■□□□□ 0
IFT88-202ENST00000351808 EME2A4GXA9 379 aaPredicted RBP15.06■□□□□ 0
IFT88-202ENST00000351808 POLR3DP05423 398 aaPredicted RBP15.06■□□□□ 0
IFT88-202ENST00000351808 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
IFT88-202ENST00000351808 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
IFT88-202ENST00000351808 ZNF483Q8TF39 744 aaPredicted RBP15.06■□□□□ 0
IFT88-202ENST00000351808 PFKFB1P16118 471 aa15.05■□□□□ 0
IFT88-202ENST00000351808 GRIK3Q13003 919 aa15.05■□□□□ 0
IFT88-202ENST00000351808 ARHGEF25Q86VW2 580 aa15.05■□□□□ 0
IFT88-202ENST00000351808 NAPGQ99747 312 aaPredicted RBP15.05■□□□□ 0
IFT88-202ENST00000351808 A0A1B0GUA9 196 aa15.04■□□□□ -0
IFT88-202ENST00000351808 TMCO5BA8MYB1 307 aa15.04■□□□□ -0
IFT88-202ENST00000351808 SPTLC2O15270 562 aa15.04■□□□□ -0
IFT88-202ENST00000351808 USP14P54578 494 aa15.04■□□□□ -0
IFT88-202ENST00000351808 PNOCQ13519 176 aa15.04■□□□□ -0
IFT88-202ENST00000351808 CCDC40Q4G0X9 1142 aa15.04■□□□□ -0
IFT88-202ENST00000351808 RNF187Q5TA31 235 aaPredicted RBP15.04■□□□□ -0
IFT88-202ENST00000351808 OTUD7BQ6GQQ9 843 aa15.04■□□□□ -0
IFT88-202ENST00000351808 CPLX3Q8WVH0 158 aa15.04■□□□□ -0
IFT88-202ENST00000351808 NCOA5Q9HCD5 579 aaKnown RBP15.04■□□□□ -0
IFT88-202ENST00000351808 ABCC1P33527 1531 aa15.04■□□□□ -0
IFT88-202ENST00000351808 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
IFT88-202ENST00000351808 KIF20BQ96Q89 1820 aa15.04■□□□□ -0
IFT88-202ENST00000351808 NBPF7P0C2Y1 421 aaPredicted RBP15.04■□□□□ -0
IFT88-202ENST00000351808 NAA25Q14CX7 972 aa15.04■□□□□ -0
IFT88-202ENST00000351808 OLFM4Q6UX06 510 aa15.04■□□□□ -0
IFT88-202ENST00000351808 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
IFT88-202ENST00000351808 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
IFT88-202ENST00000351808 MYH15Q9Y2K3 1946 aa15.04■□□□□ -0
IFT88-202ENST00000351808 ZFYVE16Q7Z3T8 1539 aa15.04■□□□□ -0
IFT88-202ENST00000351808 CRB1P82279 1406 aa15.03■□□□□ -0
IFT88-202ENST00000351808 PDHBP11177 359 aa15.03■□□□□ -0
IFT88-202ENST00000351808 PDE4BQ07343 736 aa15.03■□□□□ -0
IFT88-202ENST00000351808 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
IFT88-202ENST00000351808 HMG20BQ9P0W2 317 aa15.03■□□□□ -0
IFT88-202ENST00000351808 ARHGEF10O15013 1369 aa15.03■□□□□ -0
IFT88-202ENST00000351808 GOLGA6BA6NDN3 693 aa15.03■□□□□ -0
IFT88-202ENST00000351808 FOXO3O43524 673 aa15.03■□□□□ -0
IFT88-202ENST00000351808 RASSF9O75901 435 aa15.03■□□□□ -0
IFT88-202ENST00000351808 MYBL2P10244 700 aa15.03■□□□□ -0
IFT88-202ENST00000351808 ARHGAP25P42331 645 aa15.03■□□□□ -0
IFT88-202ENST00000351808 SMTNP53814 917 aa15.03■□□□□ -0
IFT88-202ENST00000351808 ZKSCAN8Q15776 578 aaPredicted RBP15.03■□□□□ -0
IFT88-202ENST00000351808 TATDN2Q93075 761 aa15.03■□□□□ -0
IFT88-202ENST00000351808 MYO6Q9UM54 1294 aa15.03■□□□□ -0
IFT88-202ENST00000351808 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
IFT88-202ENST00000351808 AKR1B15C9JRZ8 316 aaPredicted RBP15.03■□□□□ -0
IFT88-202ENST00000351808 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
IFT88-202ENST00000351808 PDCLQ13371 301 aa15.03■□□□□ -0
IFT88-202ENST00000351808 E2F5Q15329 346 aa15.03■□□□□ -0
IFT88-202ENST00000351808 ARMC2Q8NEN0 867 aa15.03■□□□□ -0
IFT88-202ENST00000351808 KCNG4Q8TDN1 519 aa15.03■□□□□ -0
IFT88-202ENST00000351808 SH3GL2Q99962 352 aa15.03■□□□□ -0
IFT88-202ENST00000351808 HINFPQ9BQA5 517 aa15.03■□□□□ -0
IFT88-202ENST00000351808 SELENOOQ9BVL4 669 aa15.03■□□□□ -0
IFT88-202ENST00000351808 A1BGP04217 495 aa15.02■□□□□ -0
IFT88-202ENST00000351808 SSBP05455 408 aaKnown RBP eCLIP15.02■□□□□ -0
IFT88-202ENST00000351808 RPSAP08865 295 aaKnown RBP15.02■□□□□ -0
IFT88-202ENST00000351808 CDC27P30260 824 aa15.02■□□□□ -0
IFT88-202ENST00000351808 GCKP35557 465 aa15.02■□□□□ -0
IFT88-202ENST00000351808 SSR1P43307 286 aaKnown RBP15.02■□□□□ -0
IFT88-202ENST00000351808 AP1ARQ63HQ0 302 aa15.02■□□□□ -0
IFT88-202ENST00000351808 ANKRD18AQ8IVF6 992 aa15.02■□□□□ -0
IFT88-202ENST00000351808 GPATCH3Q96I76 525 aa15.02■□□□□ -0
IFT88-202ENST00000351808 FSD1Q9BTV5 496 aa15.02■□□□□ -0
IFT88-202ENST00000351808 SLC40A1Q9NP59 571 aa15.02■□□□□ -0
IFT88-202ENST00000351808 ABCC6O95255 1503 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms