RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PDCP20941 246 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 CCDC73Q6ZRK6 1079 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 TRIM74Q86UV6 250 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 TRIM73Q86UV7 250 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 NOA1Q8NC60 698 aaKnown RBP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 EIF3HO15372 352 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 ARHGAP6O43182 974 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 GBP2P32456 591 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 AARSP49588 968 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 FOSBP53539 338 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 TLDC1Q6P9B6 456 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
CAPN3-203ENST00000349748 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
CAPN3-203ENST00000349748 ICA1Q05084 483 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 C1QTNF12Q5T7M4 302 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 RNF187Q5TA31 235 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-203ENST00000349748 THEMIS2Q5TEJ8 643 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
CAPN3-203ENST00000349748 TECPR2O15040 1411 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 MEFVO15553 781 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-203ENST00000349748 CFAP100Q494V2 611 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 PDILTQ8N807 584 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 PAIP2Q9BPZ3 127 aaKnown RBP12.13□□□□□ -0.47
CAPN3-203ENST00000349748 SDF4Q9BRK5 362 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 CDC23Q9UJX2 597 aa12.13□□□□□ -0.47
CAPN3-203ENST00000349748 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 GOLGA6CA6NDK9 693 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 GOLGA6DP0CG33 693 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 MTF1Q14872 753 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 NCAPHQ15003 741 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 GBP3Q9H0R5 595 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 SLC40A1Q9NP59 571 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 GOLGA6AQ9NYA3 693 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 JAK2O60674 1132 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 RASSF9O75901 435 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 CDC25CP30307 473 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 UBASH3AP57075 661 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 PTH1RQ03431 593 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 ESCO1Q5FWF5 840 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 NFXL1Q6ZNB6 911 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 FSIP1Q8NA03 581 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 KLHL23Q8NBE8 558 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 COQ9O75208 318 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 SERPINC1P01008 464 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 RAB27AP51159 221 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 AKAP17AQ02040 695 aaKnown RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 FCHSD1Q86WN1 690 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 CCDC13Q8IYE1 715 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-203ENST00000349748 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
CAPN3-203ENST00000349748 DLC1Q96QB1 1528 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 A1BGP04217 495 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
CAPN3-203ENST00000349748 SMTNP53814 917 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
CAPN3-203ENST00000349748 RESTQ13127 1097 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 MTX1Q13505 466 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 SNCBQ16143 134 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 GSPT2Q8IYD1 628 aaKnown RBP12.11□□□□□ -0.47
CAPN3-203ENST00000349748 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ZMYND10O75800 440 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 STIM1Q13586 685 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ENGASEQ8NFI3 743 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
CAPN3-203ENST00000349748 ACEP12821 1306 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms