RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SECISBP2LQ93073 1101 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 GMEB2Q9UKD1 530 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 KDM5BQ9UGL1 1544 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 PAK2Q13177 524 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 ZNF174Q15697 407 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 OLFM4Q6UX06 510 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 FAM184AQ8NB25 1140 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 KIAA1468Q9P260 1216 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 KIF3AQ9Y496 699 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 ABCC5O15440 1437 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 RBM47A0AV96 593 aaKnown RBP6.84□□□□□ -1.31
RFC1-201ENST00000349703 ERC2O15083 957 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 HNRNPCP07910 306 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC1-201ENST00000349703 TNNT1P13805 278 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
RFC1-201ENST00000349703 MGEA5O60502 916 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 MT-CO1P00395 513 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 GOLGA8FQ08AF8 430 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 ZNF394Q53GI3 561 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 TRIM75PA6NK02 468 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 DTNBO60941 627 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 OSBPP22059 807 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 SMARCA1P28370 1054 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 ATICP31939 592 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 PRPF38BQ5VTL8 546 aaKnown RBP6.84□□□□□ -1.31
RFC1-201ENST00000349703 SMC5Q8IY18 1101 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 MPP5Q8N3R9 675 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 PPP1R9BQ96SB3 815 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 STIM2Q9P246 746 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 NESP48681 1621 aa6.84□□□□□ -1.31
RFC1-201ENST00000349703 ELL2O00472 640 aaPredicted RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 EPB41L2O43491 1005 aaKnown RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 ZNF165P49910 485 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 MVPQ14764 893 aaKnown RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 TOMM20Q15388 145 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 ITPRIPL1Q6GPH6 555 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 CTNNBL1Q8WYA6 563 aaPredicted RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 GOLGA1Q92805 767 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 FAM167BQ9BTA0 163 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 CEP44Q9C0F1 390 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 LUC7L2Q9Y383 392 aaKnown RBP6.84□□□□□ -1.32
RFC1-201ENST00000349703 DNMBPQ6XZF7 1577 aa6.84□□□□□ -1.32
RFC1-201ENST00000349703 KDM5CP41229 1560 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 BICRAQ9NZM4 1560 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 GAS2O43903 313 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 PAX3P23760 479 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 TIGD6Q17RP2 521 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 GIMAP6Q6P9H5 292 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 CPA4Q9UI42 421 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 MKL2Q9ULH7 1088 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 NOL7Q9UMY1 257 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 REC8O95072 547 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 RASGRP1O95267 797 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 EIF2AK2P19525 551 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 EFHC2Q5JST6 749 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 GOLM1Q8NBJ4 401 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 HNRNPLLQ8WVV9 542 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 MOAP1Q96BY2 351 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 RIPOR2Q9Y4F9 1068 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 ATP6V1DQ9Y5K8 247 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 FAM170AA1A519 330 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 SYCE3A1L190 88 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 PRAMEF27A3QJZ7 478 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 KIF3BO15066 747 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 TBC1D8O95759 1140 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 DNM2P50570 870 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 HEATR6Q6AI08 1181 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 SIL1Q9H173 461 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 MAPK8IP1Q9UQF2 711 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 PCDHGA4Q9Y5G9 962 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 GAPVD1Q14C86 1478 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 IGHDP01880 384 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 ZAP70P43403 619 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 SYCP2LQ5T4T6 812 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 ZC3H7AQ8IWR0 971 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 USB1Q9BQ65 265 aaKnown RBP6.83□□□□□ -1.32
RFC1-201ENST00000349703 ANKIB1Q9P2G1 1089 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 POLIQ9UNA4 740 aa6.83□□□□□ -1.32
RFC1-201ENST00000349703 HMMRO75330 724 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 ECI1P42126 302 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 POLGP54098 1239 aaPredicted RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
RFC1-201ENST00000349703 PXYLP1Q8TE99 480 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 GCC1Q96CN9 775 aa6.82□□□□□ -1.32
RFC1-201ENST00000349703 NUDT16Q96DE0 195 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms