RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ATP1A3P13637 1013 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MYSM1Q5VVJ2 828 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 ZNF34Q8IZ26 560 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 LCORLQ8N3X6 602 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 DPF2Q92785 391 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 PDCL3Q9H2J4 239 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 LY9Q9HBG7 655 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 RTEL1Q9NZ71 1219 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CLIP2Q9UDT6 1046 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 BCORQ6W2J9 1755 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 BAZ2AQ9UIF9 1905 aaKnown RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 PHLPP1O60346 1717 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CYP2D7A0A087X1C5 515 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 hCG_1642624A0A1W2PR95 340 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 FAM205CA6NFA0 338 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 SH2B2O14492 632 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 ZNF213O14771 459 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 HMGB1P09429 215 aaKnown RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 KLRK1P26718 216 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 TOB1P50616 345 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CCZ1BP86790 482 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CCZ1P86791 482 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 PTPAQ15257 358 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 EARS2Q5JPH6 523 aaKnown RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CCDC24Q8N4L8 307 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MIGA1Q8NAN2 632 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CNNM1Q9NRU3 951 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 A0A0U1RQG5 324 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 GSG1L2A8MUP6 293 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 VEGFAP15692 232 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 FAM160A1Q05DH4 1040 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 IMMTQ16891 758 aaKnown RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MICU3Q86XE3 530 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 DZIP3Q86Y13 1208 aaKnown RBP7.06□□□□□ -1.28
CLCN3-201ENST00000347613 LRRC8AQ8IWT6 810 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MAGEB6Q8N7X4 407 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 MED15Q96RN5 788 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 CFAP45Q9UL16 551 aa7.06□□□□□ -1.28
CLCN3-201ENST00000347613 PLEKHG2Q9H7P9 1386 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLCN3-201ENST00000347613 PDE4BQ07343 736 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 SF3A1Q15459 793 aaKnown RBP7.05□□□□□ -1.28
CLCN3-201ENST00000347613 HSP90AA4PQ58FG1 418 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 APOA5Q6Q788 366 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 KIF6Q6ZMV9 814 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 USP49Q70CQ1 688 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 C8orf76Q96K31 380 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 PRDM10Q9NQV6 1147 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 KCNJ14Q9UNX9 436 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 MYH2Q9UKX2 1941 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 LRP5O75197 1615 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 ARAP2Q8WZ64 1704 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 CDHR2Q9BYE9 1310 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 DYNC1I1O14576 645 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 APPP05067 770 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 PFKFB1P16118 471 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 ARID4AP29374 1257 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-201ENST00000347613 ADALQ6DHV7 355 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 FILIP1Q7Z7B0 1213 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 NCOA7Q8NI08 942 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 OXER1Q8TDS5 423 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 TRMT1Q9NXH9 659 aaKnown RBP7.05□□□□□ -1.28
CLCN3-201ENST00000347613 CICQ96RK0 1608 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-201ENST00000347613 BCL9LQ86UU0 1499 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 ZNF202O95125 648 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 MBD4O95243 580 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 PNOCQ13519 176 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 ARMCX5Q6P1M9 558 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 DRC7Q8IY82 874 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 GRAMD1CQ8IYS0 662 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 IFNL3Q8IZI9 196 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 SDR42E1Q8WUS8 393 aa7.05□□□□□ -1.28
CLCN3-201ENST00000347613 MYH13Q9UKX3 1938 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 ANKRD18BA2A2Z9 1011 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 EIF5P55010 431 aaKnown RBP7.04□□□□□ -1.28
CLCN3-201ENST00000347613 HMGN5P82970 282 aaKnown RBP7.04□□□□□ -1.28
CLCN3-201ENST00000347613 LONRF3Q496Y0 759 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 KRT40Q6A162 431 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 VPS37DQ86XT2 251 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-201ENST00000347613 SPATA5Q8NB90 893 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLCN3-201ENST00000347613 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 V9GYY5 206 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-201ENST00000347613 ATRNO75882 1429 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 A0A1B0GUL6 1792 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 A0A0G2JS52 829 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 SPTLC2O15270 562 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 CASP1P29466 404 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 NR5A1Q13285 461 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 ZMYND15Q9H091 742 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 KIAA1468Q9P260 1216 aa7.04□□□□□ -1.28
CLCN3-201ENST00000347613 SPDYE4A6NLX3 237 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 PDE8AO60658 829 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 STARD3NLO95772 234 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 PRR29P0C7W0 189 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms