RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SERPINA10Q9UK55 444 aa22.8■■□□□ 1.24
CHMP4A-201ENST00000347519 HSPD1P10809 573 aaKnown RBP22.79■■□□□ 1.24
CHMP4A-201ENST00000347519 RPS12P25398 132 aaKnown RBP22.79■■□□□ 1.24
CHMP4A-201ENST00000347519 RHBDL3P58872 404 aa22.79■■□□□ 1.24
CHMP4A-201ENST00000347519 GPC2Q8N158 579 aa22.79■■□□□ 1.24
CHMP4A-201ENST00000347519 ZDHHC15Q96MV8 337 aa22.79■■□□□ 1.24
CHMP4A-201ENST00000347519 REC8O95072 547 aa22.78■■□□□ 1.24
CHMP4A-201ENST00000347519 ZNF280AP59817 542 aaPredicted RBP22.78■■□□□ 1.24
CHMP4A-201ENST00000347519 DPF2Q92785 391 aa22.78■■□□□ 1.24
CHMP4A-201ENST00000347519 EGFRP00533 1210 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 RBM5P52756 815 aaKnown RBP eCLIP22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 KIAA1211Q6ZU35 1233 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 MICALL2Q8IY33 904 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 SDR42E1Q8WUS8 393 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 PRMT6Q96LA8 375 aaPredicted RBP22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 EPB41L4AQ9HCS5 686 aaPredicted RBP22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 CNOT7Q9UIV1 285 aaKnown RBP22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 HDAC9Q9UKV0 1011 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 SLC4A4Q9Y6R1 1079 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 BAZ2AQ9UIF9 1905 aaKnown RBP22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 FOCADQ5VW36 1801 aa22.77■■□□□ 1.24
CHMP4A-201ENST00000347519 GSG1L2A8MUP6 293 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 BAG3O95817 575 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 CDC42EP5Q6NZY7 148 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 OGFOD1Q8N543 542 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 ZBED3Q96IU2 234 aaPredicted RBP22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 NOL10Q9BSC4 688 aaKnown RBP22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 DSCC1Q9BVC3 393 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 USP40Q9NVE5 1235 aa22.76■■□□□ 1.23
CHMP4A-201ENST00000347519 PATL2C9JE40 543 aaKnown RBP22.75■■□□□ 1.23
CHMP4A-201ENST00000347519 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
CHMP4A-201ENST00000347519 MYOZ2Q9NPC6 264 aa22.75■■□□□ 1.23
CHMP4A-201ENST00000347519 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
CHMP4A-201ENST00000347519 RBM8AQ9Y5S9 174 aaKnown RBP22.75■■□□□ 1.23
CHMP4A-201ENST00000347519 ZC3H4Q9UPT8 1303 aaKnown RBP22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 NAV1Q8NEY1 1877 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 EPS15P42566 896 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 DLGAP5Q15398 846 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 RBM26Q5T8P6 1007 aaKnown RBP22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 TEX11Q8IYF3 940 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 IFNL3Q8IZI9 196 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 MTMR14Q8NCE2 650 aa22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 CRNKL1Q9BZJ0 848 aaKnown RBP22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 TDRD3Q9H7E2 651 aaKnown RBP22.74■■□□□ 1.23
CHMP4A-201ENST00000347519 WDHD1O75717 1129 aaPredicted RBP22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 FGAP02671 866 aa22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 APPP05067 770 aa22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 GNAT2P19087 354 aa22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 CACNB3P54284 484 aa22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 TBC1D10BQ4KMP7 808 aaPredicted RBP22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 TGFBRAP1Q8WUH2 860 aa22.73■■□□□ 1.23
CHMP4A-201ENST00000347519 DDX60LQ5H9U9 1706 aaKnown RBP22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 NBPF9Q3BBW0 867 aa22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 TRPM4Q8TD43 1214 aa22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 DDX4Q9NQI0 724 aaKnown RBP22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 MKRN1Q9UHC7 482 aaKnown RBP22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 PALD1Q9ULE6 856 aa22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 TAF6LQ9Y6J9 622 aa22.72■■□□□ 1.23
CHMP4A-201ENST00000347519 GLTPD2A6NH11 291 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 SMIM22K7EJ46 135 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 WNT10BO00744 389 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 PLCG2P16885 1265 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 EVX2Q03828 476 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 NFIAQ12857 509 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 ALX1Q15699 326 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 MAPKAPK5Q8IW41 473 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 C22orf23Q9BZE7 217 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 DCP1AQ9NPI6 582 aaPredicted RBP22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 ASTN2O75129 1339 aaPredicted RBP22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 LAMA4Q16363 1823 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 MYH1P12882 1939 aa22.71■■□□□ 1.23
CHMP4A-201ENST00000347519 CLRN2A0PK11 232 aa22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 EPB41L2O43491 1005 aaKnown RBP22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 EIF5BO60841 1220 aaKnown RBP22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 HSPA4P34932 840 aa22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 USP5P45974 858 aa22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 DPY19L2Q6NUT2 758 aa22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 TBC1D32Q96NH3 1257 aa22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 U3KPZ7 1027 aaPredicted RBP22.7■■□□□ 1.22
CHMP4A-201ENST00000347519 RPAP1Q9BWH6 1393 aaPredicted RBP22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 H7C1D1 291 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 SLC27A2O14975 620 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 MMP14P50281 582 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 KIF4BQ2VIQ3 1234 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 CREB3L3Q68CJ9 461 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 CERS3Q8IU89 383 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 RASEFQ8IZ41 740 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 L3MBTL3Q96JM7 780 aaPredicted RBP22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 ZNF70Q9UC06 446 aaPredicted RBP22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 LAMB1P07942 1786 aa22.69■■□□□ 1.22
CHMP4A-201ENST00000347519 FLT1P17948 1338 aa22.68■■□□□ 1.22
CHMP4A-201ENST00000347519 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
CHMP4A-201ENST00000347519 CYP2D6P10635 497 aa22.68■■□□□ 1.22
CHMP4A-201ENST00000347519 HIRAP54198 1017 aaPredicted RBP22.68■■□□□ 1.22
CHMP4A-201ENST00000347519 PICALMQ13492 652 aa22.68■■□□□ 1.22
CHMP4A-201ENST00000347519 SPDYE2Q495Y8 402 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms