RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 SDR42E1Q8WUS8 393 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
ECM1-201ENST00000346569 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
ECM1-201ENST00000346569 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 NAPBQ9H115 298 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
ECM1-201ENST00000346569 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
ECM1-201ENST00000346569 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
ECM1-201ENST00000346569 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 TACC3Q9Y6A5 838 aa13.04□□□□□ -0.32
ECM1-201ENST00000346569 DLEC1Q9Y238 1755 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 G3V3G9 751 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 MB21D2Q8IYB1 491 aaPredicted RBP13.03□□□□□ -0.32
ECM1-201ENST00000346569 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 GAKO14976 1311 aa13.03□□□□□ -0.32
ECM1-201ENST00000346569 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.32
ECM1-201ENST00000346569 ECE2O60344 883 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 AOC3Q16853 763 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 SOGA3Q5TF21 947 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 TCEANC2Q96MN5 208 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
ECM1-201ENST00000346569 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.33
ECM1-201ENST00000346569 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.33
ECM1-201ENST00000346569 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
ECM1-201ENST00000346569 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
ECM1-201ENST00000346569 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
ECM1-201ENST00000346569 BAG3O95817 575 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 FGRP09769 529 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 TDO2P48775 406 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 ME3Q16798 604 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 SBK1Q52WX2 424 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
ECM1-201ENST00000346569 DACT2Q5SW24 774 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 CTR9Q6PD62 1173 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 Q6ZUG5 572 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
ECM1-201ENST00000346569 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
ECM1-201ENST00000346569 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
ECM1-201ENST00000346569 WDR19Q8NEZ3 1342 aa13□□□□□ -0.33
ECM1-201ENST00000346569 USP17L3A6NCW0 530 aa13□□□□□ -0.33
ECM1-201ENST00000346569 USP17L4A6NCW7 530 aa13□□□□□ -0.33
ECM1-201ENST00000346569 YDJCA8MPS7 323 aa13□□□□□ -0.33
ECM1-201ENST00000346569 USP17L12C9JPN9 530 aa13□□□□□ -0.33
ECM1-201ENST00000346569 USP17L21D6R901 530 aa13□□□□□ -0.33
ECM1-201ENST00000346569 LARGE1O95461 756 aa13□□□□□ -0.33
ECM1-201ENST00000346569 EVCP57679 992 aa13□□□□□ -0.33
ECM1-201ENST00000346569 ANTXR2P58335 489 aa13□□□□□ -0.33
ECM1-201ENST00000346569 RHBDL3P58872 404 aa13□□□□□ -0.33
ECM1-201ENST00000346569 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
ECM1-201ENST00000346569 AKNAD1Q5T1N1 836 aa13□□□□□ -0.33
ECM1-201ENST00000346569 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
ECM1-201ENST00000346569 USP17L1Q7RTZ2 530 aa13□□□□□ -0.33
ECM1-201ENST00000346569 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
ECM1-201ENST00000346569 INCENPQ9NQS7 918 aa13□□□□□ -0.33
ECM1-201ENST00000346569 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
ECM1-201ENST00000346569 MCM5P33992 734 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 HDLBPQ00341 1268 aaKnown RBP12.99□□□□□ -0.33
ECM1-201ENST00000346569 PPARAQ07869 468 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 DAGLAQ9Y4D2 1042 aa12.99□□□□□ -0.33
ECM1-201ENST00000346569 PLCG2P16885 1265 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 BTDP43251 543 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 TRDNQ13061 729 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 CYB5R4Q7L1T6 521 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 CNNM2Q9H8M5 875 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
ECM1-201ENST00000346569 MAST2Q6P0Q8 1798 aa12.98□□□□□ -0.33
ECM1-201ENST00000346569 NEDD4P46934 1319 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 CYP2D7A0A087X1C5 515 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 MINDY4BA8MYZ0 360 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 PRC1O43663 620 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 TGFBRAP1Q8WUH2 860 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 BRF1Q92994 677 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms