RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 GLT8D2Q9H1C3 349 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 PRAMEF22A3QJZ6 481 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 NR1I2O75469 434 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
CLCN6-202ENST00000346436 KIF2CQ99661 725 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 EFCAB6Q5THR3 1501 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLCN6-202ENST00000346436 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
CLCN6-202ENST00000346436 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
CLCN6-202ENST00000346436 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 CBX8Q9HC52 389 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 RTL9Q8NET4 1388 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 CCDC66A2RUB6 948 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 FAM193AP78312 1265 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 TMCO3Q6UWJ1 677 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 CCDC172P0C7W6 258 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 SYKP43405 635 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 BIRC2Q13490 618 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 FPGT-TNNI3KV9GXZ4 949 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 KAT6BQ8WYB5 2073 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
CLCN6-202ENST00000346436 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-202ENST00000346436 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 ATP2B4P23634 1241 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 NAPAP54920 295 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 CACNA2D4Q7Z3S7 1137 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
CLCN6-202ENST00000346436 SYNCQ9H7C4 482 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 TLR7Q9NYK1 1049 aaKnown RBP12.34□□□□□ -0.43
CLCN6-202ENST00000346436 KRT13P13646 458 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 CNGA1P29973 690 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 CASQ1P31415 396 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 AOX1Q06278 1338 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 CTNNA2P26232 953 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 AZI2Q9H6S1 392 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 LARGE1O95461 756 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 IDEP14735 1019 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 UBASH3AP57075 661 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 IQCEQ6IPM2 695 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 IFNKQ9P0W0 207 aa12.34□□□□□ -0.43
CLCN6-202ENST00000346436 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.43
CLCN6-202ENST00000346436 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.43
CLCN6-202ENST00000346436 ZEB2O60315 1214 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 GSDMDP57764 484 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
CLCN6-202ENST00000346436 PUF60Q9UHX1 559 aaKnown RBP12.33□□□□□ -0.44
CLCN6-202ENST00000346436 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 GLI2P10070 1586 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 C2orf69Q8N8R5 385 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 MTMR6Q9Y217 621 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 SPTLC2O15270 562 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
CLCN6-202ENST00000346436 CALML3P27482 149 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 AFF2P51816 1311 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 NEMFO60524 1076 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 OSBPP22059 807 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 GNA11P29992 359 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 AFMP43652 599 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 SLC8A3P57103 927 aa12.33□□□□□ -0.44
CLCN6-202ENST00000346436 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 PAXBP1Q9Y5B6 917 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 DNM2P50570 870 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 ZSCAN12O43309 604 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 LRMPQ12912 555 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 AXDND1Q5T1B0 1012 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-202ENST00000346436 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-202ENST00000346436 ABCC3O15438 1527 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 A0A087WWV3 80 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-202ENST00000346436 GNG11P61952 73 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms