RNA–Protein interactions for RNA: ENST00000346042.7

PDE8B-205, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,276 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-205ENST00000346042 SGSM2O43147 1006 aa17.05■□□□□ 0.32
PDE8B-205ENST00000346042 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
PDE8B-205ENST00000346042 C15orf52Q6ZUT6 534 aaKnown RBP17.05■□□□□ 0.32
PDE8B-205ENST00000346042 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
PDE8B-205ENST00000346042 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 SEMA3EO15041 775 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 TEX11Q8IYF3 940 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 ZNF512BQ96KM6 892 aaPredicted RBP17.04■□□□□ 0.32
PDE8B-205ENST00000346042 TNIP1Q15025 636 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 FZD9O00144 591 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 VIL1P09327 827 aaKnown RBP17.04■□□□□ 0.32
PDE8B-205ENST00000346042 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
PDE8B-205ENST00000346042 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
PDE8B-205ENST00000346042 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
PDE8B-205ENST00000346042 HSPD1P10809 573 aaKnown RBP17.03■□□□□ 0.32
PDE8B-205ENST00000346042 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
PDE8B-205ENST00000346042 CTDSPL2Q05D32 466 aa17.03■□□□□ 0.32
PDE8B-205ENST00000346042 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDE8B-205ENST00000346042 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
PDE8B-205ENST00000346042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.02■□□□□ 0.32
PDE8B-205ENST00000346042 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 RRAGCQ9HB90 399 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 KIAA1551Q9HCM1 1747 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
PDE8B-205ENST00000346042 FGAP02671 866 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.31
PDE8B-205ENST00000346042 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 MIGA2Q7L4E1 593 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 SLC44A5Q8NCS7 719 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.31
PDE8B-205ENST00000346042 NAPBQ9H115 298 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 ZNF408Q9H9D4 720 aa17.02■□□□□ 0.31
PDE8B-205ENST00000346042 RBM8AQ9Y5S9 174 aaKnown RBP17.02■□□□□ 0.31
PDE8B-205ENST00000346042 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 USP17L21D6R901 530 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 H7C1D1 291 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 WNT10BO00744 389 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
PDE8B-205ENST00000346042 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
PDE8B-205ENST00000346042 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 DYNLL2Q96FJ2 89 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 CENPFP49454 3210 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 MYH13Q9UKX3 1938 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
PDE8B-205ENST00000346042 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 PPFIA3O75145 1194 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 BAG3O95817 575 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 GRIPAP1Q4V328 841 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 RIOK1Q9BRS2 568 aaKnown RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 TMEM39BQ9GZU3 492 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 KIF13BQ9NQT8 1826 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 LRRFIP1Q32MZ4 808 aaKnown RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 C22orf23Q9BZE7 217 aa17■□□□□ 0.31
PDE8B-205ENST00000346042 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
PDE8B-205ENST00000346042 POLR3DP05423 398 aaPredicted RBP16.99■□□□□ 0.31
PDE8B-205ENST00000346042 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
PDE8B-205ENST00000346042 SLC4A3P48751 1232 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 ANGEL2Q5VTE6 544 aaKnown RBP16.99■□□□□ 0.31
PDE8B-205ENST00000346042 KIF4BQ2VIQ3 1234 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 RAB11FIP4Q86YS3 637 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 FOXP2O15409 715 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 LDHCP07864 332 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 HIRAP54198 1017 aaPredicted RBP16.99■□□□□ 0.31
PDE8B-205ENST00000346042 ZKSCAN3Q9BRR0 538 aa16.99■□□□□ 0.31
PDE8B-205ENST00000346042 GSG1L2A8MUP6 293 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 HIP1O00291 1037 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 REC8O95072 547 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 PLCD1P51178 756 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 IFNL3Q8IZI9 196 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 NKX2-3Q8TAU0 364 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
PDE8B-205ENST00000346042 RAD21O60216 631 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 GSTO1P78417 241 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 ADCK5Q3MIX3 580 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
PDE8B-205ENST00000346042 GPC2Q8N158 579 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 GMLQ99445 158 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 GPRC5DQ9NZD1 345 aa16.98■□□□□ 0.31
PDE8B-205ENST00000346042 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
PDE8B-205ENST00000346042 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
PDE8B-205ENST00000346042 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
PDE8B-205ENST00000346042 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
PDE8B-205ENST00000346042 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.97■□□□□ 0.31
PDE8B-205ENST00000346042 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
PDE8B-205ENST00000346042 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
PDE8B-205ENST00000346042 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
PDE8B-205ENST00000346042 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
PDE8B-205ENST00000346042 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms