RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 IMMTQ16891 758 aaKnown RBP16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 AATFQ9NY61 560 aaKnown RBP eCLIP16.42■□□□□ 0.22
MS4A4A-202ENST00000343968 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
MS4A4A-202ENST00000343968 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
MS4A4A-202ENST00000343968 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
MS4A4A-202ENST00000343968 TBC1D2Q9BYX2 928 aa16.41■□□□□ 0.22
MS4A4A-202ENST00000343968 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
MS4A4A-202ENST00000343968 PRKAB2O43741 272 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 ST18O60284 1047 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 PLCG2P16885 1265 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 NAPBQ9H115 298 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 ZNF213O14771 459 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 APPP05067 770 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 MCM2P49736 904 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 TTC14Q96N46 770 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 GMLQ99445 158 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
MS4A4A-202ENST00000343968 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.22
MS4A4A-202ENST00000343968 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 BTDP43251 543 aa16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 NEK4P51957 841 aa16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
MS4A4A-202ENST00000343968 E7EWF7 191 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 CD2BP2O95400 341 aaKnown RBP16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 MMP14P50281 582 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 RHBDL3P58872 404 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 TEKT1Q969V4 418 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
MS4A4A-202ENST00000343968 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 NBPF3Q9H094 633 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 FZD9O00144 591 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 PSMD14O00487 310 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 CRKP46108 304 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 TDO2P48775 406 aa16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
MS4A4A-202ENST00000343968 K7ELQ4 463 aaPredicted RBP16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 PRELPP51888 382 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 RASSF7Q02833 373 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 CXCL9Q07325 125 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 DICER1Q9UPY3 1922 aaKnown RBP16.36■□□□□ 0.21
MS4A4A-202ENST00000343968 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 RAD17O75943 681 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 CIAPIN1Q6FI81 312 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 KIAA0825Q8IV33 1275 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 WDR19Q8NEZ3 1342 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 LAMB1P07942 1786 aa16.35■□□□□ 0.21
MS4A4A-202ENST00000343968 SOCS7O14512 581 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 FGRP09769 529 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 NT5C2P49902 561 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 HAND2P61296 217 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 PPARAQ07869 468 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 TNIP1Q15025 636 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 BAZ2AQ9UIF9 1905 aaKnown RBP16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 NAV1Q8NEY1 1877 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 USP5P45974 858 aa16.34■□□□□ 0.21
MS4A4A-202ENST00000343968 SCNN1DP51172 638 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms