RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.56
CLDN18-202ENST00000343735 RAB11FIP4Q86YS3 637 aa11.58□□□□□ -0.56
CLDN18-202ENST00000343735 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
CLDN18-202ENST00000343735 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
CLDN18-202ENST00000343735 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.56
CLDN18-202ENST00000343735 LRRC2Q9BYS8 371 aa11.58□□□□□ -0.56
CLDN18-202ENST00000343735 PUS7LQ9H0K6 701 aaKnown RBP11.58□□□□□ -0.56
CLDN18-202ENST00000343735 M0R2C6 588 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 PLCG2P16885 1265 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 MMP14P50281 582 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 IL17RAQ96F46 866 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 MRIQ9BWK5 157 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 FHDC1Q9C0D6 1143 aaPredicted RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 RBM8AQ9Y5S9 174 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 DBNDD1Q9H9R9 158 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 PATL2C9JE40 543 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 PRDX5P30044 214 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 PTH1RQ03431 593 aa11.57□□□□□ -0.56
CLDN18-202ENST00000343735 COL9A3Q14050 684 aaPredicted RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
CLDN18-202ENST00000343735 PSMA5P28066 241 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 NECTIN1Q15223 517 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 ALX1Q15699 326 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 FERMT3Q86UX7 667 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 KCNB2Q92953 911 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 ZNRF3Q9ULT6 936 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 BRCA1P38398 1863 aaKnown RBP11.56□□□□□ -0.56
CLDN18-202ENST00000343735 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 ZMYM6O95789 1325 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 MBD4O95243 580 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 HDLBPQ00341 1268 aaKnown RBP11.56□□□□□ -0.56
CLDN18-202ENST00000343735 GIMAP6Q6P9H5 292 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 CCDC129Q6ZRS4 1044 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 CRNKL1Q9BZJ0 848 aaKnown RBP11.56□□□□□ -0.56
CLDN18-202ENST00000343735 APPP05067 770 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 IMMTQ16891 758 aaKnown RBP11.56□□□□□ -0.56
CLDN18-202ENST00000343735 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 NECAB1Q8N987 351 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 NLGN2Q8NFZ4 835 aa11.56□□□□□ -0.56
CLDN18-202ENST00000343735 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
CLDN18-202ENST00000343735 PPP4CP60510 307 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 SYT17Q9BSW7 474 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 SOCS7O14512 581 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 ST18O60284 1047 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 CLCN1P35523 988 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 SLC4A4Q9Y6R1 1079 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 MROH7-TTC4A0A0A0MT08 1334 aa11.55□□□□□ -0.56
CLDN18-202ENST00000343735 TNIP1Q15025 636 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
CLDN18-202ENST00000343735 HMGB1P09429 215 aaKnown RBP11.54□□□□□ -0.56
CLDN18-202ENST00000343735 DACT2Q5SW24 774 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 ATP8A2Q9NTI2 1148 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 ARFGEF1Q9Y6D6 1849 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 SLC27A2O14975 620 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 TEKT1Q969V4 418 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 RIOK1Q9BRS2 568 aaKnown RBP11.54□□□□□ -0.56
CLDN18-202ENST00000343735 NAPBQ9H115 298 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
CLDN18-202ENST00000343735 TTF2Q9UNY4 1162 aaKnown RBP11.54□□□□□ -0.56
CLDN18-202ENST00000343735 ZNF213O14771 459 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 MCM2P49736 904 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 GAS2L3Q86XJ1 694 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 AMOTL1Q8IY63 956 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 GPR75-ASB3A0A0A6YYF3 556 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 FGD1P98174 961 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
CLDN18-202ENST00000343735 SNX14Q9Y5W7 946 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 GAKO14976 1311 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-202ENST00000343735 FGAP02671 866 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 VIL1P09327 827 aaKnown RBP11.53□□□□□ -0.56
CLDN18-202ENST00000343735 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 LCORLQ8N3X6 602 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 AGBL3Q8NEM8 1001 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 SNX21Q969T3 373 aa11.53□□□□□ -0.56
CLDN18-202ENST00000343735 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.56
CLDN18-202ENST00000343735 NFKBIEO00221 500 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 TDO2P48775 406 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 NT5C2P49902 561 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 EIF6P56537 245 aaKnown RBP11.52□□□□□ -0.57
CLDN18-202ENST00000343735 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 RSBN1LQ6PCB5 846 aaPredicted RBP11.52□□□□□ -0.57
CLDN18-202ENST00000343735 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLDN18-202ENST00000343735 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
CLDN18-202ENST00000343735 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms