RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TEX33O43247 280 aa17.02■□□□□ 0.31
CLCN1-201ENST00000343257 MAGEA9P43362 315 aa17.02■□□□□ 0.31
CLCN1-201ENST00000343257 KIF23Q02241 960 aaPredicted RBP17.02■□□□□ 0.31
CLCN1-201ENST00000343257 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.31
CLCN1-201ENST00000343257 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.31
CLCN1-201ENST00000343257 RIN2Q8WYP3 895 aaPredicted RBP17.02■□□□□ 0.31
CLCN1-201ENST00000343257 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 CASP8Q14790 479 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 RAD9BQ6WBX8 426 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 PHKBQ93100 1093 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 JCADQ9P266 1359 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 STX10O60499 249 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 EIF3JO75822 258 aaKnown RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 PRC1O43663 620 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 CCDC175P0C221 793 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
CLCN1-201ENST00000343257 FCHSD1Q86WN1 690 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 SLC35F6Q8N357 371 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 HAUS7Q99871 368 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
CLCN1-201ENST00000343257 LRRIQ3A6PVS8 624 aaPredicted RBP17■□□□□ 0.31
CLCN1-201ENST00000343257 ERLIN1O75477 346 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 PRR29P0C7W0 189 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
CLCN1-201ENST00000343257 COPS6Q7L5N1 327 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 ACRBPQ8NEB7 543 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 L1RE1Q9UN81 338 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 GOLGA6L9A6NEM1 432 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 M0R2C6 588 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 KIF5CO60282 957 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 ZMYND10O75800 440 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 AKAP12Q02952 1782 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 GNL3Q9BVP2 549 aaKnown RBP eCLIP17■□□□□ 0.31
CLCN1-201ENST00000343257 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
CLCN1-201ENST00000343257 NEURL1BA8MQ27 555 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 NOA1Q8NC60 698 aaKnown RBP16.99■□□□□ 0.31
CLCN1-201ENST00000343257 GCKRQ14397 625 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
CLCN1-201ENST00000343257 CDC23Q9UJX2 597 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 GRIN1Q05586 938 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
CLCN1-201ENST00000343257 MAST3O60307 1309 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 RBL2Q08999 1139 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 TBX2Q13207 712 aaPredicted RBP16.98■□□□□ 0.31
CLCN1-201ENST00000343257 C1orf141Q5JVX7 400 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 RAI14Q9P0K7 980 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 HOXB7P09629 217 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
CLCN1-201ENST00000343257 AKR1B15C9JRZ8 316 aaPredicted RBP16.97■□□□□ 0.31
CLCN1-201ENST00000343257 BRAPQ7Z569 592 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 IQUBQ8NA54 791 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 MYL10Q9BUA6 226 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 CASP1P29466 404 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 LIG3P49916 1009 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 PPFIBP1Q86W92 1011 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 GSPT2Q8IYD1 628 aaKnown RBP16.97■□□□□ 0.31
CLCN1-201ENST00000343257 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
CLCN1-201ENST00000343257 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 ADGRG1Q9Y653 693 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
CLCN1-201ENST00000343257 RNF40O75150 1001 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 CEP112Q8N8E3 955 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
CLCN1-201ENST00000343257 GUCY2CP25092 1073 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 IGSF22Q8N9C0 903 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 OSBP2Q969R2 916 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 AGXT2Q9BYV1 514 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CACNA1FO60840 1977 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CTAGE15A4D2H0 777 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CTAGE9A4FU28 777 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 POLR2DO15514 142 aaKnown RBP16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CTAGE8P0CG41 777 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 KRT40Q6A162 431 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 TTC19Q6DKK2 380 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-201ENST00000343257 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CTAGE6Q86UF2 777 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 CTAGE4Q8IX94 777 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
CLCN1-201ENST00000343257 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.31
CLCN1-201ENST00000343257 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms