RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ECE1P42892 770 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 MAP3K12Q12852 859 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 CERS3Q8IU89 383 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 HOOK2Q96ED9 719 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TEPSINQ96N21 525 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 HAUS7Q99871 368 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PIH1D3Q9NQM4 214 aaKnown RBP15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 USP40Q9NVE5 1235 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SCAF8Q9UPN6 1271 aaKnown RBP15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 AKAP11Q9UKA4 1901 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TCP10L2B9ZVM9 353 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 BTDP43251 543 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 HUNKP57058 714 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PPP4CP60510 307 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 NAA16Q6N069 864 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 FAM151AQ8WW52 585 aa15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 MKRN1Q9UHC7 482 aaKnown RBP15.92■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TTC41PQ6P2S7 1318 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PAPPA2Q9BXP8 1791 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ENTPD3O75355 529 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 BAG3O95817 575 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RHBDL3P58872 404 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ARMC9Q7Z3E5 817 aa15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQA1-201ENST00000343139 PLCG2P16885 1265 aa15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 VEGFBP49765 207 aa15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 NBPF12Q5TAG4 269 aaPredicted RBP15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 CCDC102AQ96A19 550 aa15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TMEM39BQ9GZU3 492 aa15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ANTXR1Q9H6X2 564 aa15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 POLR2AP24928 1970 aaKnown RBP15.9■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SSC5DA1L4H1 1573 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 SALL3Q9BXA9 1300 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 WDR33Q9C0J8 1336 aaKnown RBP15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 IDH1O75874 414 aaKnown RBP15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CACNB3P54284 484 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 LDLRAD1Q5T700 205 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 RGMBQ6NW40 437 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 NOL10Q9BSC4 688 aaKnown RBP15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 PAG1Q9NWQ8 432 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 FAM198AQ9UFP1 575 aa15.89■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ERC2O15083 957 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 IGHDP01880 384 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MAP2K2P36507 400 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 NFIAQ12857 509 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ANKRD45Q5TZF3 282 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
HLA-DQA1-201ENST00000343139 GOLIM4O00461 696 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 NDUFB9Q9Y6M9 179 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 COL2A1P02458 1487 aaPredicted RBP15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MAST2Q6P0Q8 1798 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 GLRX3O76003 335 aaKnown RBP15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MX1P20591 662 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CYP7A1P22680 504 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 IREB2P48200 963 aaKnown RBP15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 NOGQ13253 232 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ADGRA1Q86SQ6 560 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 STAP2Q9UGK3 403 aa15.87■□□□□ 0.13
HLA-DQA1-201ENST00000343139 FAM155AB1AL88 458 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 USP2O75604 605 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 SLC10A3P09131 477 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 RGS3P49796 1198 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ZNF157P51786 506 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 NUCB1Q02818 461 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 DCAF15Q66K64 600 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 PI4K2BQ8TCG2 481 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ANGEL1Q9UNK9 670 aaKnown RBP15.86■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ATRNL1Q5VV63 1379 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 UBE2Q2LH0YL09 131 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 PDE6AP16499 860 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MAP3K10Q02779 954 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ZSCAN25Q6NSZ9 544 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CDAN1Q8IWY9 1227 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 AATFQ9NY61 560 aaKnown RBP eCLIP15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MYH2Q9UKX2 1941 aa15.85■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TCRBV5S4A2TA0A5A2 114 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TCP10Q12799 353 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 UBE3CQ15386 1083 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 MOB2Q70IA6 237 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 CHD1LQ86WJ1 897 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TICAM2Q86XR7 235 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 TEX11Q8IYF3 940 aa15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQA1-201ENST00000343139 ANKRD13AQ8IZ07 590 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms