RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 APOA5Q6Q788 366 aa27.81■■■□□ 2.04
NELFB-201ENST00000343053 SHC4Q6S5L8 630 aa27.81■■■□□ 2.04
NELFB-201ENST00000343053 TTLL11Q8NHH1 800 aa27.81■■■□□ 2.04
NELFB-201ENST00000343053 DPF2Q92785 391 aa27.81■■■□□ 2.04
NELFB-201ENST00000343053 ZMYM6O95789 1325 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 CTDSPL2Q05D32 466 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 BRINP3Q76B58 766 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 CHMP4CQ96CF2 233 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 COL5A2P05997 1499 aaPredicted RBP27.8■■■□□ 2.04
NELFB-201ENST00000343053 SFPQP23246 707 aaKnown RBP eCLIP27.8■■■□□ 2.04
NELFB-201ENST00000343053 EVA1CP58658 441 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 LRRN4CLQ8ND94 238 aa27.8■■■□□ 2.04
NELFB-201ENST00000343053 SH2B2O14492 632 aaPredicted RBP27.79■■■□□ 2.04
NELFB-201ENST00000343053 CSF1RP07333 972 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 CMA1P23946 247 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 HSPA2P54652 639 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 GSDMDP57764 484 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 PIGBQ92521 554 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 RANBP6O60518 1105 aaKnown RBP27.79■■■□□ 2.04
NELFB-201ENST00000343053 SLC39A14Q15043 492 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 SYT10Q6XYQ8 523 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 ZKSCAN3Q9BRR0 538 aa27.79■■■□□ 2.04
NELFB-201ENST00000343053 OSBPL5Q9H0X9 879 aaPredicted RBP27.79■■■□□ 2.04
NELFB-201ENST00000343053 FANCCQ00597 558 aa27.78■■■□□ 2.04
NELFB-201ENST00000343053 PPP1R13BQ96KQ4 1090 aa27.78■■■□□ 2.04
NELFB-201ENST00000343053 CMTR1Q8N1G2 835 aaKnown RBP27.78■■■□□ 2.04
NELFB-201ENST00000343053 KIF18AQ8NI77 898 aa27.78■■■□□ 2.04
NELFB-201ENST00000343053 FOXN1O15353 648 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 PDE6AP16499 860 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 RRP12Q5JTH9 1297 aaKnown RBP27.77■■■□□ 2.04
NELFB-201ENST00000343053 NLRP10Q86W26 655 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 TOMM22Q9NS69 142 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 CCDC102BQ68D86 513 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 SLC26A6Q9BXS9 759 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 HSD3B7Q9H2F3 369 aa27.77■■■□□ 2.04
NELFB-201ENST00000343053 TRMT112Q9UI30 125 aaKnown RBP27.77■■■□□ 2.04
NELFB-201ENST00000343053 ANKRD18BA2A2Z9 1011 aa27.76■■■□□ 2.04
NELFB-201ENST00000343053 GOLGA8AA7E2F4 631 aa27.76■■■□□ 2.04
NELFB-201ENST00000343053 IRS4O14654 1257 aaPredicted RBP27.76■■■□□ 2.04
NELFB-201ENST00000343053 CTSWP56202 376 aa27.76■■■□□ 2.04
NELFB-201ENST00000343053 NKX1-1Q15270 411 aaPredicted RBP27.76■■■□□ 2.04
NELFB-201ENST00000343053 KMT5BQ4FZB7 885 aa27.76■■■□□ 2.04
NELFB-201ENST00000343053 AIDAQ96BJ3 306 aa27.76■■■□□ 2.04
NELFB-201ENST00000343053 TNS2Q63HR2 1409 aa27.76■■■□□ 2.03
NELFB-201ENST00000343053 DDX60Q8IY21 1712 aaKnown RBP27.76■■■□□ 2.03
NELFB-201ENST00000343053 ZBTB43O43298 467 aa27.76■■■□□ 2.03
NELFB-201ENST00000343053 TMEM67Q5HYA8 995 aa27.76■■■□□ 2.03
NELFB-201ENST00000343053 TOGARAM1Q9Y4F4 1720 aa27.76■■■□□ 2.03
NELFB-201ENST00000343053 PAPPAQ13219 1627 aa27.76■■■□□ 2.03
NELFB-201ENST00000343053 CGNQ9P2M7 1197 aaKnown RBP27.75■■■□□ 2.03
NELFB-201ENST00000343053 TBC1D2BQ9UPU7 963 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 IARSP41252 1262 aaKnown RBP27.75■■■□□ 2.03
NELFB-201ENST00000343053 TPM4P67936 248 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 MAP3K15Q6ZN16 1313 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 TMEM232C9JQI7 657 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 SERPINC1P01008 464 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 GUCY1A2P33402 732 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 GIGYF2Q6Y7W6 1299 aaKnown RBP27.75■■■□□ 2.03
NELFB-201ENST00000343053 TICAM2Q86XR7 235 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 TACC3Q9Y6A5 838 aa27.75■■■□□ 2.03
NELFB-201ENST00000343053 UBN2Q6ZU65 1347 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 ATP2B1P20020 1258 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 CFAP100Q494V2 611 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 LONRF3Q496Y0 759 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 SHANK3Q9BYB0 1731 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 ECM29Q5VYK3 1845 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 PTPAQ15257 358 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 FBXO38Q6PIJ6 1188 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 BPIFA3Q9BQP9 254 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 ARMT1Q9H993 441 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 KCNJ14Q9UNX9 436 aa27.74■■■□□ 2.03
NELFB-201ENST00000343053 A0A0G2JS52 829 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 GRIN1Q05586 938 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 LY9Q9HBG7 655 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 EPB41L4AQ9HCS5 686 aaPredicted RBP27.73■■■□□ 2.03
NELFB-201ENST00000343053 IMPACTQ9P2X3 320 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 MBD4O95243 580 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 SYCP1Q15431 976 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 HOMER1Q86YM7 354 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 MAGEB6Q8N7X4 407 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 VGLL2Q8N8G2 317 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 CCDC150Q8NCX0 1101 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 CARD10Q9BWT7 1032 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 ZBTB1Q9Y2K1 713 aa27.73■■■□□ 2.03
NELFB-201ENST00000343053 PRKAB2O43741 272 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 METTL16Q86W50 562 aaKnown RBP27.72■■■□□ 2.03
NELFB-201ENST00000343053 PLA2G12BQ9BX93 195 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 FAM217BQ9NTX9 383 aaPredicted RBP27.72■■■□□ 2.03
NELFB-201ENST00000343053 FBXO3Q9UK99 471 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 IFIT3O14879 490 aaKnown RBP27.72■■■□□ 2.03
NELFB-201ENST00000343053 PDE8BO95263 885 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 UBASH3AP57075 661 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 TRIM28Q13263 835 aaKnown RBP27.72■■■□□ 2.03
NELFB-201ENST00000343053 TRIM29Q14134 588 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 IGDCC4Q8TDY8 1250 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 MAP3K14Q99558 947 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 ZSWIM5Q9P217 1185 aa27.72■■■□□ 2.03
NELFB-201ENST00000343053 STARD3NLO95772 234 aa27.71■■■□□ 2.03
NELFB-201ENST00000343053 CPLX2Q6PUV4 134 aaKnown RBP27.71■■■□□ 2.03
NELFB-201ENST00000343053 FOXP4Q8IVH2 680 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms