RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
PMS1-201ENST00000342075 CXCL9Q07325 125 aa16.58■□□□□ 0.24
PMS1-201ENST00000342075 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
PMS1-201ENST00000342075 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
PMS1-201ENST00000342075 CACNB3P54284 484 aa16.58■□□□□ 0.24
PMS1-201ENST00000342075 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
PMS1-201ENST00000342075 ZNRF3Q9ULT6 936 aa16.58■□□□□ 0.24
PMS1-201ENST00000342075 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
PMS1-201ENST00000342075 ZBTB22O15209 634 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 PATL2C9JE40 543 aaKnown RBP16.57■□□□□ 0.24
PMS1-201ENST00000342075 CYP2D6P10635 497 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 NEK4P51957 841 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 TICAM2Q86XR7 235 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 SBF1O95248 1867 aa16.57■□□□□ 0.24
PMS1-201ENST00000342075 DTNBO60941 627 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 TDO2P48775 406 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 RBM5P52756 815 aaKnown RBP eCLIP16.56■□□□□ 0.24
PMS1-201ENST00000342075 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 NAPBQ9H115 298 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 ZNF541Q9H0D2 1346 aa16.56■□□□□ 0.24
PMS1-201ENST00000342075 CRKP46108 304 aa16.55■□□□□ 0.24
PMS1-201ENST00000342075 RHBDL3P58872 404 aa16.55■□□□□ 0.24
PMS1-201ENST00000342075 KCNB2Q92953 911 aa16.55■□□□□ 0.24
PMS1-201ENST00000342075 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
PMS1-201ENST00000342075 SCAF8Q9UPN6 1271 aaKnown RBP16.55■□□□□ 0.24
PMS1-201ENST00000342075 GAKO14976 1311 aa16.55■□□□□ 0.24
PMS1-201ENST00000342075 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
PMS1-201ENST00000342075 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
PMS1-201ENST00000342075 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 E7EWF7 191 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 SLURP2P0DP57 97 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 PICALMQ13492 652 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 EGFRP00533 1210 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 VIL1P09327 827 aaKnown RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 GSTO1P78417 241 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
PMS1-201ENST00000342075 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
PMS1-201ENST00000342075 LTBP3Q9NS15 1303 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
PMS1-201ENST00000342075 ANAPC15P60006 121 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 NFIAQ12857 509 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 RABEP1Q15276 862 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 DDX4Q9NQI0 724 aaKnown RBP16.53■□□□□ 0.24
PMS1-201ENST00000342075 NEDD4P46934 1319 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 USP17L21D6R901 530 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 ZNF213O14771 459 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
PMS1-201ENST00000342075 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
PMS1-201ENST00000342075 RNF20Q5VTR2 975 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 TEX11Q8IYF3 940 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 GMLQ99445 158 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
PMS1-201ENST00000342075 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
PMS1-201ENST00000342075 USP5P45974 858 aa16.52■□□□□ 0.24
PMS1-201ENST00000342075 CTR9Q6PD62 1173 aa16.52■□□□□ 0.24
PMS1-201ENST00000342075 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.23
PMS1-201ENST00000342075 CDC42EP5Q6NZY7 148 aa16.52■□□□□ 0.23
PMS1-201ENST00000342075 PRMT6Q96LA8 375 aaPredicted RBP16.52■□□□□ 0.23
PMS1-201ENST00000342075 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
PMS1-201ENST00000342075 MCM9Q9NXL9 1143 aa16.52■□□□□ 0.23
PMS1-201ENST00000342075 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.23
PMS1-201ENST00000342075 PRDM1O75626 825 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 BAG3O95817 575 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 LDHCP07864 332 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 GNAT2P19087 354 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
PMS1-201ENST00000342075 NOL10Q9BSC4 688 aaKnown RBP16.51■□□□□ 0.23
PMS1-201ENST00000342075 TDRD3Q9H7E2 651 aaKnown RBP16.51■□□□□ 0.23
PMS1-201ENST00000342075 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
PMS1-201ENST00000342075 ECM29Q5VYK3 1845 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 PPP4CP60510 307 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 GPR162Q16538 588 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
PMS1-201ENST00000342075 FLT1P17948 1338 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 FZD9O00144 591 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
PMS1-201ENST00000342075 AK2P54819 239 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 PPARAQ07869 468 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 TCP10Q12799 353 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
PMS1-201ENST00000342075 DYNLL2Q96FJ2 89 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms