RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ZNF512BQ96KM6 892 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 KLRG2A4D1S0 409 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 SLC27A2O14975 620 aa17.68■□□□□ 0.42
BRAT1-201ENST00000340611 FOXP2O15409 715 aa17.68■□□□□ 0.42
BRAT1-201ENST00000340611 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 ADD2P35612 726 aa17.68■□□□□ 0.42
BRAT1-201ENST00000340611 HAND2P61296 217 aa17.68■□□□□ 0.42
BRAT1-201ENST00000340611 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
BRAT1-201ENST00000340611 XDHP47989 1333 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 USP48Q86UV5 1035 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 FEZ1Q99689 392 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 APPP05067 770 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-201ENST00000340611 RAI14Q9P0K7 980 aa17.67■□□□□ 0.42
BRAT1-201ENST00000340611 GPAA1O43292 621 aa17.66■□□□□ 0.42
BRAT1-201ENST00000340611 GRIK5Q16478 980 aa17.66■□□□□ 0.42
BRAT1-201ENST00000340611 ANKRD7Q92527 254 aa17.66■□□□□ 0.42
BRAT1-201ENST00000340611 HELLSQ9NRZ9 838 aa17.66■□□□□ 0.42
BRAT1-201ENST00000340611 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
BRAT1-201ENST00000340611 IRS2Q9Y4H2 1338 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
BRAT1-201ENST00000340611 PRDX5P30044 214 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 PDE6BP35913 854 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 CUL4AQ13619 759 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 TERF2Q15554 542 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 APPBP2Q92624 585 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 CRAMP1Q96RY5 1269 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.421e-6■■■■■ 30.3
BRAT1-201ENST00000340611 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 BBOX1O75936 387 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 CYP21A2P08686 494 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 NPR1P16066 1061 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 MYH13Q9UKX3 1938 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 PRKAB2O43741 272 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-201ENST00000340611 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
BRAT1-201ENST00000340611 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
BRAT1-201ENST00000340611 SLX4Q8IY92 1834 aa17.64■□□□□ 0.41
BRAT1-201ENST00000340611 ADCY5O95622 1261 aa17.64■□□□□ 0.41
BRAT1-201ENST00000340611 MASTLQ96GX5 879 aa17.64■□□□□ 0.41
BRAT1-201ENST00000340611 LOC102724159A0A0B4J2E5 919 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 H0YIN7 160 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 MBD4O95243 580 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 SLC20A2Q08357 652 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 PWP2Q15269 919 aaKnown RBP17.63■□□□□ 0.41
BRAT1-201ENST00000340611 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 ST7Q9NRC1 585 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-201ENST00000340611 MCM2P49736 904 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 RFX7Q2KHR2 1363 aa17.63■□□□□ 0.41
BRAT1-201ENST00000340611 CYP7A1P22680 504 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 LCORLQ8N3X6 602 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 KCNG1Q9UIX4 513 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 ATP6V0A2Q9Y487 856 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 CHD4Q14839 1912 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 SMIM22K7EJ46 135 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 NCBP1Q09161 790 aaKnown RBP17.62■□□□□ 0.41
BRAT1-201ENST00000340611 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 CALCOCO1Q9P1Z2 691 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 CNPY2Q9Y2B0 182 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 LEMD3Q9Y2U8 911 aa17.62■□□□□ 0.41
BRAT1-201ENST00000340611 FGAP02671 866 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-201ENST00000340611 DYNLL1P63167 89 aaKnown RBP17.61■□□□□ 0.41
BRAT1-201ENST00000340611 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
BRAT1-201ENST00000340611 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 MXD3Q9BW11 206 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-201ENST00000340611 ANAPC15P60006 121 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 NKX2-3Q8TAU0 364 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
BRAT1-201ENST00000340611 DOCK2Q92608 1830 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 AK2P54819 239 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 INTS4Q96HW7 963 aaKnown RBP17.6■□□□□ 0.41
BRAT1-201ENST00000340611 CD209Q9NNX6 404 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 UBE3CQ15386 1083 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
BRAT1-201ENST00000340611 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
BRAT1-201ENST00000340611 TULP2O00295 520 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms