RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 CLCN1P35523 988 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
HIPK1-201ENST00000340480 USP25Q9UHP3 1055 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 MED23Q9ULK4 1368 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 NFAT5O94916 1531 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 TOPAZ1Q8N9V7 1692 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 SPAG1Q07617 926 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 GGA1Q9UJY5 639 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 AMPD3Q01432 767 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 CLSTN2Q9H4D0 955 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 LUC7LQ9NQ29 371 aaKnown RBP8.72□□□□□ -1.01
HIPK1-201ENST00000340480 TCP11L1Q9NUJ3 509 aa8.72□□□□□ -1.01
HIPK1-201ENST00000340480 ZNHIT6Q9NWK9 470 aaKnown RBP8.72□□□□□ -1.01
HIPK1-201ENST00000340480 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.01
HIPK1-201ENST00000340480 CARMIL3Q8ND23 1372 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 CYP21A2P08686 494 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 ADD2P35612 726 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 TYRO3Q06418 890 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 NAP1L4Q99733 375 aaKnown RBP8.71□□□□□ -1.01
HIPK1-201ENST00000340480 PARP3Q9Y6F1 533 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 SALL3Q9BXA9 1300 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 RPS6KA4O75676 772 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 RCAN1P53805 252 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.01
HIPK1-201ENST00000340480 TPCN1Q9ULQ1 816 aa8.71□□□□□ -1.01
HIPK1-201ENST00000340480 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.01
HIPK1-201ENST00000340480 SPATA31A6Q5VVP1 1343 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 KAT6BQ8WYB5 2073 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 MYO1BO43795 1136 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 FGFR1OPO95684 399 aaKnown RBP8.71□□□□□ -1.02
HIPK1-201ENST00000340480 ATP2B4P23634 1241 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 STK11IPQ8N1F8 1099 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 CCDC150Q8NCX0 1101 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 GLT8D2Q9H1C3 349 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 EHMT1Q9H9B1 1298 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 MCM9Q9NXL9 1143 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 ADCY5O95622 1261 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 CHRNDQ07001 517 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.71□□□□□ -1.02
HIPK1-201ENST00000340480 EDC3Q96F86 508 aaKnown RBP8.71□□□□□ -1.02
HIPK1-201ENST00000340480 SCLT1Q96NL6 688 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 NWD1Q149M9 1564 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 FAM196AQ6ZSG2 479 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
HIPK1-201ENST00000340480 PXDNQ92626 1479 aa8.71□□□□□ -1.02
HIPK1-201ENST00000340480 ARMT1Q9H993 441 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 PIK3C2AO00443 1686 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 GOLGA6L9A6NEM1 432 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 B4E1Z4 1266 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 FGAP02671 866 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 GNA11P29992 359 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 FOXO4P98177 505 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 IFNL3Q8IZI9 196 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 MNS1Q8NEH6 495 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 MPHOSPH6Q99547 160 aaKnown RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ATP8A2Q9NTI2 1148 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ZMYM6O95789 1325 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ZSCAN12O43309 604 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 KRT2P35908 639 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 GIMAP6Q6P9H5 292 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 MIGA1Q8NAN2 632 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CABP5Q9NP86 173 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CSF1RP07333 972 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ANO1Q5XXA6 986 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 IQSEC3Q9UPP2 1182 aaPredicted RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ZKSCAN5Q9Y2L8 839 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CUTAO60888 179 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF76P36508 570 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 CFAP100Q494V2 611 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 KIF2CQ99661 725 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 C6orf50Q9HD87 102 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 PPP1R2P41236 205 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ALX1Q15699 326 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 RGS22Q8NE09 1264 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 TTC14Q96N46 770 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 BSDC1Q9NW68 430 aaPredicted RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
HIPK1-201ENST00000340480 ZNF142P52746 1687 aaPredicted RBP8.7□□□□□ -1.02
HIPK1-201ENST00000340480 FSD2A1L4K1 749 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 UBA7P41226 1012 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 MATR3P43243 847 aaKnown RBP eCLIP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 VPS72Q15906 364 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 STX8Q9UNK0 236 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 SPATA31A1Q5TZJ5 1347 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 ERLIN2O94905 339 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 LIFRP42702 1097 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 PHKA1P46020 1223 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 EIF5P55010 431 aaKnown RBP8.69□□□□□ -1.02
HIPK1-201ENST00000340480 PDILTQ8N807 584 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 CCDC112Q8NEF3 446 aa8.69□□□□□ -1.02
HIPK1-201ENST00000340480 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms