RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 URI1O94763 535 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 SERPINC1P01008 464 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 IL2RBP14784 551 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 GSDMDP57764 484 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 CABP4P57796 275 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 GRIN1Q05586 938 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 PLBD2Q8NHP8 589 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 EYA2O00167 538 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 TULP1O00294 542 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 EVA1CP58658 441 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 NLRP12P59046 1061 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 MB21D2Q8IYB1 491 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 GRAMD1CQ8IYS0 662 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 CARD6Q9BX69 1037 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 FANCLQ9NW38 375 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 CCDC93Q567U6 631 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 L2HGDHQ9H9P8 463 aa13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 ZCCHC17Q9NP64 241 aaKnown RBP13.82□□□□□ -0.2
CCDC144CP-201ENST00000340196 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 A0A1W2PQ27 194 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 A0A1W2PQ64 194 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 A0A1W2PQD8 194 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 H7C1W4 665 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 H2AFXP16104 143 aaPredicted RBP13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 BMP6P22004 513 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 UBASH3AP57075 661 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 CYB5R4Q7L1T6 521 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 TBC1D10CQ8IV04 446 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 CMTR1Q8N1G2 835 aaKnown RBP13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 KCNG4Q8TDN1 519 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 ATRIPQ8WXE1 791 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 XAGE2Q96GT9 111 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 TOM1O60784 492 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 SYKP43405 635 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 LONRF3Q496Y0 759 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 TRIM65Q6PJ69 517 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 FAM89AQ96GI7 184 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 CWC25Q9NXE8 425 aaPredicted RBP13.81□□□□□ -0.2
CCDC144CP-201ENST00000340196 GPAA1O43292 621 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 PDILTQ8N807 584 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 SECISBP2LQ93073 1101 aaKnown RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 WDR24Q96S15 920 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 ALG1Q9BT22 464 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 IRX2Q9BZI1 471 aaPredicted RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 RFX7Q2KHR2 1363 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 PNMA6AP0CW24 399 aaPredicted RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 GYS2P54840 703 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 ADKP55263 362 aaKnown RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 RALYLQ86SE5 291 aaKnown RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
CCDC144CP-201ENST00000340196 B4E1Z4 1266 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 TFRCP02786 760 aaKnown RBP13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 APPP05067 770 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 CCDC150Q8NCX0 1101 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 SNAP23O00161 211 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 YEATS4O95619 227 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 ETF1P62495 437 aaKnown RBP13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 KRT40Q6A162 431 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 ARFGEF2Q9Y6D5 1785 aa13.79□□□□□ -0.2
CCDC144CP-201ENST00000340196 COBLO75128 1261 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 MTF1Q14872 753 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 CEP126Q9P2H0 1117 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 ZNF213O14771 459 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 SASH3O75995 380 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 KARSQ15046 597 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms