RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 MTX1Q13505 466 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 CFAP100Q494V2 611 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 BZW1Q7L1Q6 419 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 NCAPG2Q86XI2 1143 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 CCDC114Q96M63 670 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 MAF1Q9H063 256 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-201ENST00000339488 SIGLEC1Q9BZZ2 1709 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 AGPSO00116 658 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 ZBED6P86452 979 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 KIF4BQ2VIQ3 1234 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 SPATA21Q7Z572 469 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 SH2D3CQ8N5H7 860 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 FAM167BQ9BTA0 163 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 ATP6V0A4Q9HBG4 840 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 CEP152O94986 1710 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 ABL1P00519 1130 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 TUBB4AP04350 444 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 SMTNP53814 917 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 SF3A3Q12874 501 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 STIM1Q13586 685 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 TMEM139Q8IV31 216 aa10.97□□□□□ -0.65
PTCHD4-201ENST00000339488 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 MLH3Q9UHC1 1453 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 PTCH1Q13635 1447 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 A0A1B0GVL5 298 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 JAK2O60674 1132 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 RTN3O95197 1032 aaPredicted RBP10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 SLC4A2P04920 1241 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 KCNJ6P48051 423 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 MRPS25P82663 173 aaKnown RBP10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 KCTD16Q68DU8 428 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 Q6ZUG5 572 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 RSRC1Q96IZ7 334 aaKnown RBP10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 SIL1Q9H173 461 aa10.96□□□□□ -0.65
PTCHD4-201ENST00000339488 PAX3P23760 479 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 SEC24CP53992 1094 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 MIS18BP1Q6P0N0 1132 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 C8orf58Q8NAV2 365 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 CDC5LQ99459 802 aaKnown RBP10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 IL1RAPL2Q9NP60 686 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 MYO6Q9UM54 1294 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 L3MBTL1Q9Y468 752 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 LAMC1P11047 1609 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 PIK3R4Q99570 1358 aa10.96□□□□□ -0.66
PTCHD4-201ENST00000339488 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 SERPINC1P01008 464 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 GNAT1P11488 350 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 LONRF3Q496Y0 759 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 ZNF569Q5MCW4 686 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 RASSF8Q8NHQ8 419 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 PIDD1Q9HB75 910 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 BACH1O14867 736 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 MYL1P05976 194 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 HDLBPQ00341 1268 aaKnown RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 PPFIA1Q13136 1202 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 RCSD1Q6JBY9 416 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 NUP58Q9BVL2 599 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 STK31Q9BXU1 1019 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 BAIAP2L1Q9UHR4 511 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 ZSCAN9O15535 394 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 PRPHP41219 470 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 UBASH3AP57075 661 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 APBA1Q02410 837 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 SLC30A9Q6PML9 568 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 KIAA1328Q86T90 577 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 FSIP1Q8NA03 581 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 ZNF396Q96N95 335 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 GBP3Q9H0R5 595 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 CDC23Q9UJX2 597 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 PCDHGC5Q9Y5F6 944 aa10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCHD4-201ENST00000339488 SOWAHDA6NJG2 315 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 DIAPH1O60610 1272 aaKnown RBP10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 AARSP49588 968 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 GUCY1A3Q02108 690 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 HSP90AB2PQ58FF8 381 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 RRP36Q96EU6 259 aaKnown RBP10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 PLEKHG4BQ96PX9 1271 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 LINGO3P0C6S8 592 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 TWISTNBQ3B726 338 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 MTRQ99707 1265 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 PHACTR1Q9C0D0 580 aa10.94□□□□□ -0.66
PTCHD4-201ENST00000339488 CTAGE15A4D2H0 777 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms