RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
NEO1-202ENST00000339362 STX10O60499 249 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 VCX3AQ9NNX9 186 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 SPOPO43791 374 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 SRGAP1Q7Z6B7 1085 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 RNF10Q8N5U6 811 aaKnown RBP18.39■□□□□ 0.53
NEO1-202ENST00000339362 NAPAP54920 295 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 STX17P56962 302 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 ZBTB24O43167 697 aaPredicted RBP18.39■□□□□ 0.53
NEO1-202ENST00000339362 SLC8A3P57103 927 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 KLHL40Q2TBA0 621 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 ATP2A3Q93084 1043 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 PHF8Q9UPP1 1060 aa18.39■□□□□ 0.53
NEO1-202ENST00000339362 VSIG1Q86XK7 387 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 FANCAO15360 1455 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 ADAMTS2O95450 1211 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 CASP2P42575 452 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 MGARPQ8TDB4 240 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 BIRC3Q13489 604 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 BAG2O95816 211 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 TNNC1P63316 161 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 CCDC26Q8TAB7 109 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 RASSF4Q9H2L5 321 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 I3L4J1 428 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 BACH1O14867 736 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 CNGA1P29973 690 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 TRIM31Q9BZY9 425 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 FOXD4Q12950 439 aaPredicted RBP18.38■□□□□ 0.53
NEO1-202ENST00000339362 WTAPQ15007 396 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 CCDC38Q502W7 563 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 HHATQ5VTY9 493 aa18.38■□□□□ 0.53
NEO1-202ENST00000339362 NOD1Q9Y239 953 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 UTP11Q9Y3A2 253 aaKnown RBP18.37■□□□□ 0.53
NEO1-202ENST00000339362 PLCB4Q15147 1175 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 BSPRYQ5W0U4 402 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 PPP1R42Q7Z4L9 355 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 KRT3P12035 628 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 CCDC125Q86Z20 511 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 NSMCE1Q8WV22 266 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 PRIMPOLQ96LW4 560 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 USTQ9Y2C2 406 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 PALM3A6NDB9 673 aaPredicted RBP18.37■□□□□ 0.53
NEO1-202ENST00000339362 RILPL1Q5EBL4 403 aa18.37■□□□□ 0.53
NEO1-202ENST00000339362 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.37■□□□□ 0.53
NEO1-202ENST00000339362 NUP160Q12769 1436 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 ZSCAN23Q3MJ62 389 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 GABPB2Q8TAK5 448 aaPredicted RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 LRRC2Q9BYS8 371 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 ANO3Q9BYT9 981 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 PNMA8AQ86V59 439 aaPredicted RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 CSRNP2Q9H175 543 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 VEZTQ9HBM0 779 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 HNRNPCL2B2RXH8 293 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 HNRNPCL1O60812 293 aaKnown RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 HP1BP3Q5SSJ5 553 aaPredicted RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 UTP14CQ5TAP6 766 aaKnown RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 FNBP1Q96RU3 617 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 ALG1Q9BT22 464 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
NEO1-202ENST00000339362 ARFGAP2Q8N6H7 521 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 GINS2Q9Y248 185 aa18.36■□□□□ 0.53
NEO1-202ENST00000339362 MUM1Q2TAK8 710 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 ARHGAP42A6NI28 874 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 POLD1P28340 1107 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 SPATA17Q96L03 361 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 B4GALNT4Q76KP1 1039 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 ITM2BQ9Y287 266 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 APOEP02649 317 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 FAF1Q9UNN5 650 aaPredicted RBP18.35■□□□□ 0.53
NEO1-202ENST00000339362 ZRANB2O95218 330 aaKnown RBP eCLIP18.35■□□□□ 0.53
NEO1-202ENST00000339362 MCM5P33992 734 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 SKA2Q8WVK7 121 aaPredicted RBP18.35■□□□□ 0.53
NEO1-202ENST00000339362 IRAK4Q9NWZ3 460 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 SLC12A2P55011 1212 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 CCDC186Q7Z3E2 898 aa18.35■□□□□ 0.53
NEO1-202ENST00000339362 LDHCP07864 332 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 UBE2HP62256 183 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 DCLK2Q8N568 766 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 NECAB1Q8N987 351 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 SDSP20132 328 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 RNF217Q8TC41 542 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 HAUS8Q9BT25 410 aa18.34■□□□□ 0.53
NEO1-202ENST00000339362 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms